Gene Svir_34870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34870 
Symbol 
ID8388809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3788788 
End bp3789432 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID644977507 
Productpredicted esterase 
Protein accessionYP_003135276 
Protein GI257057444 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.786447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.216686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC TGGCGTTGGA ACACGAGTTC GTCGAGGGCA GTCCCACCGT CCCCGCGTTG 
TTGTTGCTGC ATGGGACGGG TGGTAGTCCG ACCGACATCC TCTCGCTCGG TAAGGAACTC
TGTCCCGCCT CCCCGATGTT GGCTCCCGCG GGGCAAGTGT CCGAACGCGG TGCCGCCCGA
TGGTTCCGTC GGCACGCCGA GGGGGTGTTC GACACCGAGG ACGTCATCTT CCGGGCTGGG
CAACTGGCCG AATTCATCGT CGAGGCGAGG AAACGCTACG GCCTGAACGA GCGCAGACTG
GTCGCGGTGG GTTTCTCCAA CGGGGCGAAC ATCGCGGCGG CGGTGGTGTT GTTGCATCCC
GAGGTGCTCA CGGAGGCGGT GCTGTTCGCG GCGATGCTGC CGGTGCCCGA AGCGCCGCGC
CATGACCTCT CGGCCACGCG GGTCTTCATG GCCAACGGGC GACAAGATCC GATGGCGCCG
TCGGCGCCCG CTCAGGAATT GGTCACCGTG TTGCGGGAGC GGGGCGCCGA CGTCACCGAA
CACTGGCACA GCGGCGGTCA CCAGATCACT GTGGACGGCC TAGCGGCGGC CAAGGAGTGG
CTGTCGGTCA ACGGTCACAA CGGGCCACAT CCGGCGAATG GGTGA
 
Protein sequence
MSELALEHEF VEGSPTVPAL LLLHGTGGSP TDILSLGKEL CPASPMLAPA GQVSERGAAR 
WFRRHAEGVF DTEDVIFRAG QLAEFIVEAR KRYGLNERRL VAVGFSNGAN IAAAVVLLHP
EVLTEAVLFA AMLPVPEAPR HDLSATRVFM ANGRQDPMAP SAPAQELVTV LRERGADVTE
HWHSGGHQIT VDGLAAAKEW LSVNGHNGPH PANG