Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34870 |
Symbol | |
ID | 8388809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3788788 |
End bp | 3789432 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977507 |
Product | predicted esterase |
Protein accession | YP_003135276 |
Protein GI | 257057444 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.786447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.216686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGC TGGCGTTGGA ACACGAGTTC GTCGAGGGCA GTCCCACCGT CCCCGCGTTG TTGTTGCTGC ATGGGACGGG TGGTAGTCCG ACCGACATCC TCTCGCTCGG TAAGGAACTC TGTCCCGCCT CCCCGATGTT GGCTCCCGCG GGGCAAGTGT CCGAACGCGG TGCCGCCCGA TGGTTCCGTC GGCACGCCGA GGGGGTGTTC GACACCGAGG ACGTCATCTT CCGGGCTGGG CAACTGGCCG AATTCATCGT CGAGGCGAGG AAACGCTACG GCCTGAACGA GCGCAGACTG GTCGCGGTGG GTTTCTCCAA CGGGGCGAAC ATCGCGGCGG CGGTGGTGTT GTTGCATCCC GAGGTGCTCA CGGAGGCGGT GCTGTTCGCG GCGATGCTGC CGGTGCCCGA AGCGCCGCGC CATGACCTCT CGGCCACGCG GGTCTTCATG GCCAACGGGC GACAAGATCC GATGGCGCCG TCGGCGCCCG CTCAGGAATT GGTCACCGTG TTGCGGGAGC GGGGCGCCGA CGTCACCGAA CACTGGCACA GCGGCGGTCA CCAGATCACT GTGGACGGCC TAGCGGCGGC CAAGGAGTGG CTGTCGGTCA ACGGTCACAA CGGGCCACAT CCGGCGAATG GGTGA
|
Protein sequence | MSELALEHEF VEGSPTVPAL LLLHGTGGSP TDILSLGKEL CPASPMLAPA GQVSERGAAR WFRRHAEGVF DTEDVIFRAG QLAEFIVEAR KRYGLNERRL VAVGFSNGAN IAAAVVLLHP EVLTEAVLFA AMLPVPEAPR HDLSATRVFM ANGRQDPMAP SAPAQELVTV LRERGADVTE HWHSGGHQIT VDGLAAAKEW LSVNGHNGPH PANG
|
| |