Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34700 |
Symbol | |
ID | 8388792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3773717 |
End bp | 3774796 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977490 |
Product | glutamine--fructose-6-phosphate transaminase |
Protein accession | YP_003135259 |
Protein GI | 257057427 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00834957 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT CGGGTGAAGG CAGGGTGGAA ACCGTGAACG ACGTCGGACC TGGCAAGCAC ATGGCCGAGG AAGTGGCCGA ACAACCGGAC GTGCTTGCGA AGCTCGTCCA GGCCCGTTCC GACATCGCCA CTGTGGGTGA CGCGATCGTA AAGCGCAGTC CCCGATTCGT GCTCCTGGCG GCACGGGGCA CCAGCGACCA CGCGGCGATC TACGCCAAAT ACCTCGTCGA GGTACTGCTG GGACTGCCCG CGGGACTCGT GTCACCGTCC ACCACCACCC TCTACCGAGC CGAGCAGGAC CTGACCGACG TACTCCTGCT CACCGTCAGC CAAAGCGGTG GTTCTTACGA CCTGTTGGAG GTCACCCAGG CCGCGCGGTC CCGCGGCGCG CTGACCGTGG CCGTCACCAA CACACCGTCG TCGCCGCTGG AGGAAGCCGC GGAACTGTCG GTGGACGTGC AGGCGGGCAC CGAGAAGGCG GTCGCCGCCA CCAAGACCTA CACCGCCACG TTGTTGGCGC TGTACCTGCT GGTCGACGCC ATGCGGAACG GCACGGGCGA ACACGTCGCC GACATCGGTG AACTCGCGTC GCGCACCCTC ACCGACACGG TCGAGGACGT CGAACGCGCC GTCGCGCGGT ACCGATTCGC CGACCGCATC CTCACCACGG CGCGCGGCTA CTCCTACGCC ACCGCGTTGG AGGGGTCGCT GAAGCTCTCG GAGACGAGCT ACCTGCCGAC CCGCGCCTAC AGCGGCGCGG ACCTGCTCCA CGGCCCCATC GCCGCCGTGG ACACCGAGAC GGCGGTGGTG GGCGTCGCCG GGATCGGGGC GGGCGGCGCC TCGATGCTCG ACGTGTTCGC CACGTTGTCC GAGCGGGGAG CCGACCTGCT GTGCGTCGGA TCGGCCGCAT GGTCGGTGCC CTCCGCCAGC CTGACGATCC CCGTCCCGGA GGTCGCCGAG GAAGTCGCCC CGATCCTGGA GGTACTGCCT CTGCAGCGCC TGGCGCTCGA ACTCGCCCTG GCGCGCGGGT TCGACCCCGA CCGGCCACGT GGCTTGCGCA AGGTGACGAG GACGCGATGA
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Protein sequence | MTDSGEGRVE TVNDVGPGKH MAEEVAEQPD VLAKLVQARS DIATVGDAIV KRSPRFVLLA ARGTSDHAAI YAKYLVEVLL GLPAGLVSPS TTTLYRAEQD LTDVLLLTVS QSGGSYDLLE VTQAARSRGA LTVAVTNTPS SPLEEAAELS VDVQAGTEKA VAATKTYTAT LLALYLLVDA MRNGTGEHVA DIGELASRTL TDTVEDVERA VARYRFADRI LTTARGYSYA TALEGSLKLS ETSYLPTRAY SGADLLHGPI AAVDTETAVV GVAGIGAGGA SMLDVFATLS ERGADLLCVG SAAWSVPSAS LTIPVPEVAE EVAPILEVLP LQRLALELAL ARGFDPDRPR GLRKVTRTR
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