| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34690 |
|---|
| Symbol | |
|---|
| ID | 8388791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3772873 |
|---|
| End bp | 3773607 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977489 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003135258 |
|---|
| Protein GI | 257057426 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0368161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACA CGCTTTCCAG GACGAGAGCG CCGCGGGAAC CGAAGTACTG GGCGCTCAAA
CAACACCTGC TCGACTTACT CGAATCCCTG CCGCCCGGCG CGGCCATCCC GACTGAGCGG
TCGCTGGCGA CGGAGTTCGG CGTCTCCCGG ACCACGGTTC GGCAGGCGTT GGCGGACCTG
ACGGCCGAGG GCAGGTTGCA CAGGGTGCAG GGCAAGGGAA CGTTCGCGGC GGAACCCAAG
ATCGCCCAGC GACTGCAGTT GTCCTCCTAC ACCGAGGACA TCCGCGCTCA GGGGCGGGAG
CCGTCGTCGC GGCTGCTGGA GATCGACGAG ATCCCGGCCG AAGGGGACCT GCCCAAGCTG
CTGAGGATCC GTACCGGGGC GAAGGTCCTG CGGGTGCAGA GGTTGCGCCT GGCCGACGGT
GAGCCCATGG CGTTGGAGAC CACTCATCTG CCGTCGGCAC GGTTCCGCGG GCTGCGTAAG
CACATCGAGT CGGGTGGATC GCTGTACGAA GCGTTGCAGG AACGCTACGG CGTGGAGCTG
GAGCGGGCGG AGGAGACCAT CGAAACATCG TTGGCGGGCC CGCAGGAGGC CGAACTGCTC
GGCGCGGATG TCGGGATGCC GGTGCTGCTG CTGGAGCGGC AGACCTTCGC CGTGGACGGC
AAACCGGTCG AGTACGTCCA TTCGATCTAC CGGGGTGACC GCTACAAGTT CGTCACGACG
TTGACCCGTC CGTGA
|
|---|
| Protein sequence | MVDTLSRTRA PREPKYWALK QHLLDLLESL PPGAAIPTER SLATEFGVSR TTVRQALADL
TAEGRLHRVQ GKGTFAAEPK IAQRLQLSSY TEDIRAQGRE PSSRLLEIDE IPAEGDLPKL
LRIRTGAKVL RVQRLRLADG EPMALETTHL PSARFRGLRK HIESGGSLYE ALQERYGVEL
ERAEETIETS LAGPQEAELL GADVGMPVLL LERQTFAVDG KPVEYVHSIY RGDRYKFVTT
LTRP
|
|---|
| |