Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34630 |
Symbol | |
ID | 8388786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3768779 |
End bp | 3769564 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977484 |
Product | thiazole-phosphate synthase |
Protein accession | YP_003135253 |
Protein GI | 257057421 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.087197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCG ATCTGGACCC CGCGGCCGGC GACGGCGACC AGCTCGTCAT CGGTGACCGC AAGTTCACCT CGCGTCTGAT CATCGGCACG GGCGGTGCCA GCAACCTCAG TGTGCTGGAA CGGGCACTCG TCGCCTCGGG GACGGAGTTG ACCACGGTCG CCATGCGGCG TGCTGACGCC GAGGGCGGTT CGGGCGTGCT GGAGTTGTTG CGGCGGTTGA ACATCGAGCT GCTGCCGAAC ACGGCGGGGT GCCGTAACGC GGCTGAGGCC GTGCTCACGG CGCAATTGGC GAGGGAGGCG CTCGAGACCG ATCTCATCAA GTTGGAGGTG CACGCCGACG ACCGGACGTT GCTGCCCGAT CCGGTGGAGA CGTTGGAGGC CGCTGAACAG CTGGTGGCCG ACGGCTTCAC CGTCATGGCC TACACCAACG ACGACCCCGT GCTGGCGTTG CGGTTGGAGG AGGCCGGCTG TGCCGCCGTC ATGCCGTTGG GCGCCCCCAT CGGCACGGGA CTCGGCATCC GTAATCCGCA CAACATCGAA TTGATCGTGG CCAGGGCCGG TGTGCCCATC ATCCTCGACG CCGGTATCGG CACGGCATCC GACGCCGCGT TGGCGATGGA ACTCGGCTGT GACGCGGTCC TGTTGGCCAC GGCGGTCACC CGAGCGCAGG ACCCGGAACG GATGGCGCGT GCCATGCGGT CGGCTGTGAT CGCGGGCCGC CTCGCCCGCC AGGCCGGTCG CATCCCTCGA CGTTTCTGGG CGCAGGCCTC CAGTCCGCCT CGCTGA
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Protein sequence | MSIDLDPAAG DGDQLVIGDR KFTSRLIIGT GGASNLSVLE RALVASGTEL TTVAMRRADA EGGSGVLELL RRLNIELLPN TAGCRNAAEA VLTAQLAREA LETDLIKLEV HADDRTLLPD PVETLEAAEQ LVADGFTVMA YTNDDPVLAL RLEEAGCAAV MPLGAPIGTG LGIRNPHNIE LIVARAGVPI ILDAGIGTAS DAALAMELGC DAVLLATAVT RAQDPERMAR AMRSAVIAGR LARQAGRIPR RFWAQASSPP R
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