Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34570 |
Symbol | |
ID | 8388780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3761307 |
End bp | 3762953 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977478 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_003135247 |
Protein GI | 257057415 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCACGGTG CCGACCGGGA GACCTCCGAC GTCAAGCCCA CCGTCACCAC CGGTCCGATC ACCGGTTCCC GCAAGGTCTA TCTCGAAACC GAGTCAGGAC TTCGGGTCCC CGTTCGACGC ATCGAGCTGT CGAACGGGGA GCATTTCGAC GTCTACGACA CCTCCGGCCC CTACACCGAT CCACAGGCCA CAATAGACGT CCACAAAGGA CTACCTAAAC TGCGGGCCCC GTGGATCGAA GGCCGGGAGC ACAAGACCCA GCTCGGCTGG GCGAAAGCCG GGGTCATCAC CCCGGAGATG GAGTTCATCG CCGCACGGGA ACGCGTCGAC CCCGAGTTCG TCCGTTCCGA GGTGGCCCGC GGACGGGCGG TCATCCCCGC CAACCGCAAC CACCCCGAGT CCGAGCCGAT GATCATCGGC AAGAACTTCC TCGTCAAGGT CAACGCCAAC ATGGGCAACT CCGCCGTGTG GTCGTCGGTG GAGGAGGAGG TCGACAAGAT GGTGTGGGCC ACCCGTTGGG GTGCCGACAC CGTCATGGAC CTGTCCACGG GCAAACGTAT CCACGAGACC CGCGAGTGGA TCCTGCGCAA CTCCCCCGTC CCCGTCGGGA CCGTGCCGAT CTACCAGGCG CTGGAGAAGG TCGGCGGTGA TCCGACGAAG CTGTCGTGGG AGGTCTACCG CGACACCGTG ATCGAGCAGT GCGAGCAGGG TGTCGACTAC ATGACCGTCC ATGCGGGAGT GTTGCTCCGG TATGTGCCGC TGACCGCCAA CCGGGTCACC GGCATCGTCT CCCGCGGCGG TTCGATCATG GCCGCGTGGT GCCTGGCACA CCACAAGGAA TCGTTCCTCT ACACGCATTT CGAGGAACTG TGCGACATCC TCCGCGAATA CGACGTGACC TTCTCCCTCG GCGACGGCCT GCGCCCGGGC TCCATCGCCG ACGCCAACGA CCGCGCCCAG TTCGCCGAGC TGGAGACGTT GGGCGAACTC ACCCGCATCG CACGGGAACG CGACGTGCAG GTGATGATCG AAGGCCCGGG GCACGTGCCC ATGCACAAGA TCAAGGAGAA CGTGGAACGG CAGGAGCGGC TCTGCGACGA GGCGCCGTTC TACACGCTCG GCCCCCTGGC CACCGACATC GCACCGGCCT ACGACCACAT CACGTCGGCC ATCGGGGCGG CGCAGATCGC CTGGTACGGC ACGGCGATGC TGTGTTACGT CACGCCGAAG GAACACCTCG GTCTGCCCAA CCGGGACGAC GTGAAGACCG GTGTCATCTC GTACAAGATC GCCGCACACG CCGCCGACCT CGCCAAGGGC CACCCGTACG CGCAGGAGTG GGACGACGCG TTGTCGAAGG CCCGGTTCGA GTTCCGCTGG AACGACCAGT TCAACCTCTC CCTGGACCCG GACACCGCGC GTTCGTTCCA TGACGAGACG CTGCCCGCGG AACCGGCCAA GACGGCGCAC TTCTGCTCCA TGTGCGGGCC GAAGTTCTGT TCCATGCGCA TCACCCAGGA CGTTCGTGCC TACGCCGAGG AACACGGCCT GACGAGTGTC GAGGCCATCG AGGCGGGCAT GCGGGAGAAG TCCCGCGAGT TCACCGAGAA GGGCGGACAG GTGTATCTAC CGGTGGTGGA CCGATGA
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Protein sequence | MHGADRETSD VKPTVTTGPI TGSRKVYLET ESGLRVPVRR IELSNGEHFD VYDTSGPYTD PQATIDVHKG LPKLRAPWIE GREHKTQLGW AKAGVITPEM EFIAARERVD PEFVRSEVAR GRAVIPANRN HPESEPMIIG KNFLVKVNAN MGNSAVWSSV EEEVDKMVWA TRWGADTVMD LSTGKRIHET REWILRNSPV PVGTVPIYQA LEKVGGDPTK LSWEVYRDTV IEQCEQGVDY MTVHAGVLLR YVPLTANRVT GIVSRGGSIM AAWCLAHHKE SFLYTHFEEL CDILREYDVT FSLGDGLRPG SIADANDRAQ FAELETLGEL TRIARERDVQ VMIEGPGHVP MHKIKENVER QERLCDEAPF YTLGPLATDI APAYDHITSA IGAAQIAWYG TAMLCYVTPK EHLGLPNRDD VKTGVISYKI AAHAADLAKG HPYAQEWDDA LSKARFEFRW NDQFNLSLDP DTARSFHDET LPAEPAKTAH FCSMCGPKFC SMRITQDVRA YAEEHGLTSV EAIEAGMREK SREFTEKGGQ VYLPVVDR
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