| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34470 |
|---|
| Symbol | |
|---|
| ID | 8388771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3752731 |
|---|
| End bp | 3753408 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977469 |
|---|
| Product | conserved hypothetical protein TIGR00266 |
|---|
| Protein accession | YP_003135238 |
|---|
| Protein GI | 257057406 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.911046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGTAC AGATTCGTCA CCAGCCTTCC TTCGCGGTCG CCAGGTTGCT GTTGGCGCCA
CACGAACCCG CGCATGTGGA AGCGGGGGCC ATGCTCGCCA CCAGCTACGG GATGCACGTG
GAGGCCCAGG CCCAGGGCGG CGTCATGAAG GGTCTCGGCA GGGCTTTGCT CGGTGGTGAA
TCGCTGTTCG TCTCCACGTA CACGGCTCCG CCCAACGGCG GCTGGGTGGA CATCGCAAGC
TCGCTCCCCG GTGACATCAG GCTGATCGAG ATGGACGGCC GTGTGGGCTG GTGCGTCACC
CGGGGGTCGT GGCTTGCGAA CTCGCACGGC ATCCAGCTGG AGACCAGGTG GGGTGGCTTC
AGCAACCTCT TCGGCGGTGA GGGGGGCTTC CTCACCCACG CCCAGGGGCA GGGACAGCTG
ATCGTGGCCT GCTACGGCGC CATCGACGTC ATCAACCTCC AGCCGGGTGA GTACGTGACC
ATCGACTCGG GGCACGTGGT GGCCTATGCC GACACCGTGC AGTCACAGCT GCGCAAGGTG
TCGAGGGGAG TGATCCAGTC GTTGAAGAGC GGCGAGGGCC TGGTGTTCGA CTTCGCGGGA
CCGGGGCAGA TCCTCACCCA GACCCGCAAC CCGGACGCCC TGCTGGCCTG GTTGCTCGCC
CGGATGCCGT CCCGGTAG
|
|---|
| Protein sequence | MQVQIRHQPS FAVARLLLAP HEPAHVEAGA MLATSYGMHV EAQAQGGVMK GLGRALLGGE
SLFVSTYTAP PNGGWVDIAS SLPGDIRLIE MDGRVGWCVT RGSWLANSHG IQLETRWGGF
SNLFGGEGGF LTHAQGQGQL IVACYGAIDV INLQPGEYVT IDSGHVVAYA DTVQSQLRKV
SRGVIQSLKS GEGLVFDFAG PGQILTQTRN PDALLAWLLA RMPSR
|
|---|
| |