| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34410 |
|---|
| Symbol | |
|---|
| ID | 8388765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3747377 |
|---|
| End bp | 3748387 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977463 |
|---|
| Product | ABC-type enterochelin transport system, permease component |
|---|
| Protein accession | YP_003135232 |
|---|
| Protein GI | 257057400 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4606] ABC-type enterochelin transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCCT CCACCACACG GCGGACCGGT GCCCGGCGAT CCGGCCCGGT CCGCCGCCGA
CACATCGTCC TCGGCGCGGT CCTGCTCGTC CTGGCGGCGT TCGGTTCGCT CTTCGTCGGG
GTCACGGAGC TGACCCCCGC CGGACTGCTG ACGGGTGACC AGGACCAGCT TCTGGTGCTG
TGGGAATCGC GGCTGCCGAG ATTGCTGGCC ATCCTGCTGG CCGGTTCGAC GTTGAGCGTC
GCGGGCCTGG TGATGATGAG CCTGACCCGT AACCGGTTCG TCACACCGTC CACAGCGGGC
ACGGCGGAAT CGGCCTCACT CGGGGTGTTG GTGGCCACCG TGTTCTTCGG GGCCGAGGCC
GTCGGCGTGA AGATGGCCGT GGCCACGGTG TTCGCCCTCC TCGGCACGGG CATGTTCCTG
ATACTGCTGC GACGGCTGAC GTTCGCCGAC ATCATCGTGG TGCCGCTCGT GGGAATCATG
TTCGGCGGCG TGATCTCGGC GGTCACCACG TTCTTCGCCT ACCGCTTCGA CCTTCTGCAA
ACACTGTCGG CCTGGACCAG CGGTGAGTTC TCCGGCGTGT TGAAGGGCCG TTACGAACTG
TTGTGGATCA CGGCGGCCGC AGCGCTCGTC GGCTATCTGT TCGCCGACCG CTTCACCCTC
GCCGGGCTCG GCAGGGACTT CGCCGTCAAC CTCGGAGTGC ACTACGACCG CGTGGTCACC
ACAGGACTCG TGCTGGTGTC GGTGATCACG GCGGTCGTGG TGGTGGCGGT GGGCAACATC
CCGTTTTTGG GGCTGGTCGT GCCCAACCTC GTCACGCTCC TGCTCGGCGA CAACCTGCGC
AGGGCACTGC CCGTCACCGC GCTGGTGGGT GCGTTCTTCG TGCTGTGCTG TGACGTGTTG
GGGCGCACGA TCCGCCACCC CTACGAGATC CCGGTCGAGA CGATCGCGGG TGTCGTGGGC
GCGGGTCTGT TCATCTTCCT CGTACTACGT GCCCGGCGGA GGACGGCATG A
|
|---|
| Protein sequence | MTSSTTRRTG ARRSGPVRRR HIVLGAVLLV LAAFGSLFVG VTELTPAGLL TGDQDQLLVL
WESRLPRLLA ILLAGSTLSV AGLVMMSLTR NRFVTPSTAG TAESASLGVL VATVFFGAEA
VGVKMAVATV FALLGTGMFL ILLRRLTFAD IIVVPLVGIM FGGVISAVTT FFAYRFDLLQ
TLSAWTSGEF SGVLKGRYEL LWITAAAALV GYLFADRFTL AGLGRDFAVN LGVHYDRVVT
TGLVLVSVIT AVVVVAVGNI PFLGLVVPNL VTLLLGDNLR RALPVTALVG AFFVLCCDVL
GRTIRHPYEI PVETIAGVVG AGLFIFLVLR ARRRTA
|
|---|
| |