Gene Svir_34400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34400 
Symbol 
ID8388764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3746472 
End bp3747380 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID644977462 
ProductABC-type enterochelin transport system, periplasmic component 
Protein accessionYP_003135231 
Protein GI257057399 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4607] ABC-type enterochelin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCTGG TGGGCCTGGT GGCCGCGTGC AGCGGCGGCT CGGAAGCGAA CACGGCGAAC 
TCCGAGGACG CGATCACAGT GGAGCACGCC CAGGGCTCCA CGAGCCTGGA GGGTACGCCG
GAACGGATCG TCGTCTTCGA CCTCGGCGTG CTCCAGACGC TGGACACCCT CGGCGTCGAG
GGCGTGGTGG GGGTCCCCGA GGTCGCGAAC ATGCCCGAAG ACCTGAGCGA GTACGCCTCC
GACGACTACA CCAAGGTCGG CAGCCTCAAG GAACCCGACT ACGAACAGGT CAACGCCCTC
GAACCCGACC TGATCATCGT CGCGGCACGA TCCGCCCCCG CCTACGGCGA ACTGTCCGAG
ATCGCCCCGA CCATCGACAT GACGGTCGAC ACGACCAACT TCCTCAACAG CGCCATCGAA
CGCATCGAAA CGCTGGGCGA ACTGTTCGGC AAGGAGGACG AGGTACGCGA CCGGCTCGAC
GCACTGACCG CCAAGGCCGA GGAGGTGAGG GACTCAGGCG CGGCCGACAA GACCGGCCTG
GTCATCCTCA CCACCGGTGG CAAGATCAGC GCCTACGGTC CCGGCTCCCG GTTCGGCATC
GTCTACGACG ACCTCGGAGT GCAACCCGCG GCCGACGACC TGTCCGCCGA CACGCACGGT
GACGCCGTCT CCGCGGAGTT CATCGCCGAG ACCGACCCCG ACCTCCTGTT CGTCATCGAC
CGTGACTCCG CCATCGGCGA GTCCGGGGAG TCGGCCAAGC AGATCCTCGA CAACGCCTTG
GTGAACGGCA CCACGGCGGC CAAGGAGGGC GGCATCGTCT ACCTCGACCC GGCCACGTGG
TACCTGACCT CCAACGGCCT GCCCTCACTG GAATCCATGA TCGAGACCAT CGGGGACAGC
GTGGCGTGA
 
Protein sequence
MGLVGLVAAC SGGSEANTAN SEDAITVEHA QGSTSLEGTP ERIVVFDLGV LQTLDTLGVE 
GVVGVPEVAN MPEDLSEYAS DDYTKVGSLK EPDYEQVNAL EPDLIIVAAR SAPAYGELSE
IAPTIDMTVD TTNFLNSAIE RIETLGELFG KEDEVRDRLD ALTAKAEEVR DSGAADKTGL
VILTTGGKIS AYGPGSRFGI VYDDLGVQPA ADDLSADTHG DAVSAEFIAE TDPDLLFVID
RDSAIGESGE SAKQILDNAL VNGTTAAKEG GIVYLDPATW YLTSNGLPSL ESMIETIGDS
VA