| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34390 |
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| Symbol | groEL |
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| ID | 8388763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3744458 |
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| End bp | 3746083 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977461 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_003135230 |
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| Protein GI | 257057398 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.950181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC TGATTGCGTT CGACGAGGAA GCCCGTCGTG GTCTCGAGCG CGGGCTGAAC
ACCCTCGCGG AGGCCGTCAA GGTGACGCTC GGCCCCCGGG GCCGCAACGT CGTGCTCGAG
AAGAAGTGGG GCGCGCCGAC GATCACCAAC GACGGTGTTT CGATCGCGAA GGAGATCGAG
CTTGAGGACC CGTGGGAGAA GATCGGGGCC GAGCTCGTCA AGGAAGTTGC CAAGAAGACC
GACGACGTCG CGGGTGACGG CACCACCACC GCCACGGTGC TCGCCCAGGC CCTCGTGAAG
GAGGGTCTGC GTAACGTTGC CGCCGGTGCC GACCCGATCG CGCTGAAGCG CGGCATCGAG
AAGGCCGTCG AGGCCATCAC CGAGCAGCTG CACAAGATGG CCAAGGAGGT CGAGACCAAG
GAGCAGATCG CGGCCACCGC GTCGATCTCC GCGGCCGACA AGACCATCGG TGAGCTGATC
GCCGAGGCCC TCGACAAGGT CGGCAAGGAA GGCGTCGTCA CCGTCGAGGA GTCCAACACC
TTCGGGCTGG AGCTCGAGCT CACCGAGGGT ATGCGCTTCG ACAAGGGCTA CATCTCCGGC
TACTTCGCCA CCGACGCCGA GCGGCAGGAA GCCGTTCTGG AGGACCCGTA CATCCTGCTG
TACGGCTCCA AGATCTCCAA CGTCAAGGAC CTGCTGCCCG TCCTCGAGAA GGTCATGCAG
GCCAACAAGC CGCTGCTGAT CATCGCCGAG GACGTCGAGG GCGAGGCCCT GGCCACCCTG
GTCGTCAACA AGATCCGCGG CACCTTCAAG TCCGTCGCCG TCAAGGCTCC GGGCTTCGGT
GACCGTCGTA AGGCGATGCT GCAGGACATG GCCATCCTCA CGGGCGGCCA GGTCATCACC
GAGGACGTCG GCCTCAAGCT GGAGAACGCC GACCTCTCCC TGCTCGGCAA GGCCCGCAAG
GTCGTCGTCA CCAAGGACGA GACCACCATC GTCGAGGGTG CCGGCGACGC GGACCAGATC
CAGGGCCGGG TCAACCAGAT CCGCGCGGAG ATCGAGAACA GCGACTCCGA CTACGACCGC
GAGAAGCTGC AGGAGCGGCT GGCCAAGCTG GCCGGTGGCG TCGCCGTCAT CAAGGCCGGC
GCTGCCACCG AGGTCGAGCT CAAGGAGCGC AAGCACCGCA TCGAGGACGC GGTGCGTAAC
GCCAAGGCCG CCGTCGAGGA GGGCATCGTC GCCGGTGGTG GCGTGACCCT GCTCCAGGCG
TCCAAGACCG CGTTCGAGGG CCTCAAGCTC GAGGGCGACG AGGCGACCGG CGCCAACATC
GTCAAGGTGG CCGTCGAGGG CCCGCTCAAG CAGATCGCGG AGAACGCGGG TCTCGAGGGT
GGCGTCGTGG TGGAGAAGGT CAAGACCCTG CCGCAGGGCC ACGGCCTGAA CGCCGCCTCG
GGCGAGTACG AGGACCTGAT GGCCGCGGGC GTCATCGACC CGGCCAAGGT GACCCGTTCC
GCCCTCCAGA ACGCCGCCTC CATCGCGGCT CTGTTCCTGA CCACGGAGGC CGTGGTCGCG
GACAAGCCGG AGAAGGAGAA GGCCGGTGAC GCGGCCGGCA TGGGCGGCAT GGACGGCATG
ATGTGA
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| Protein sequence | MAKLIAFDEE ARRGLERGLN TLAEAVKVTL GPRGRNVVLE KKWGAPTITN DGVSIAKEIE
LEDPWEKIGA ELVKEVAKKT DDVAGDGTTT ATVLAQALVK EGLRNVAAGA DPIALKRGIE
KAVEAITEQL HKMAKEVETK EQIAATASIS AADKTIGELI AEALDKVGKE GVVTVEESNT
FGLELELTEG MRFDKGYISG YFATDAERQE AVLEDPYILL YGSKISNVKD LLPVLEKVMQ
ANKPLLIIAE DVEGEALATL VVNKIRGTFK SVAVKAPGFG DRRKAMLQDM AILTGGQVIT
EDVGLKLENA DLSLLGKARK VVVTKDETTI VEGAGDADQI QGRVNQIRAE IENSDSDYDR
EKLQERLAKL AGGVAVIKAG AATEVELKER KHRIEDAVRN AKAAVEEGIV AGGGVTLLQA
SKTAFEGLKL EGDEATGANI VKVAVEGPLK QIAENAGLEG GVVVEKVKTL PQGHGLNAAS
GEYEDLMAAG VIDPAKVTRS ALQNAASIAA LFLTTEAVVA DKPEKEKAGD AAGMGGMDGM
M
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