Gene Svir_34370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34370 
Symbol 
ID8388761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3742649 
End bp3743590 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content67% 
IMG OID644977459 
Producthypothetical protein 
Protein accessionYP_003135228 
Protein GI257057396 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA GCGACCACCG CCGGCGAGAG CGCGTTCATC CGCGAACCAC CCGGCCACGG 
GGATCGAGAG GAGACGGAGT CATCCCGCAC GCCCGCAGCG AGGTCCGCGT CGGCACGTCG
GGCTGGGTCT ATGCCAACTG GCGAGGGGTC TTCTACCCGA AGGACCTGCG CCGGGGGCAT
GAATTGGAAT ACCTCTCCCG TCGCCTGAAC ACCGTCGAGA TAAACGGGTC GTTCTATTCG
CTGCAACGCC CGCAACGGTA TCTGCGGTGG AAAGCCGCGA CACCGGATGA CTTCCGATTC
GCCGTCAAGG GCAGCCGATT CATCACCCAC ATGAAACAGC TCCATGACGT GGACTCGGCA
CTGGCGAACT TCTTCGCCTC CGGCGTGCTG GCCCTGGAGG AGAAACTCGG GCCGATCCTG
TGGCAACTGC CCCCGCGGCT CGCCTTCGAC CCGGATCGAC TCGCCTCGTT CCTCGACCGC
CTCCCCCGTA GTACGGGGGG AGCCGCAGCG CTGGCCCGTC ACCACGACGA CAAGGTGACC
TTCGAACCGC ACACCGACGT CGAGACCGAC CGGCCGCTAC GGTACGCGCT CGAGGCACGG
CATCCCAGTT TCGCCGATCC TCGTTGCCTC GCCCTGCTGC GCACCCACGA CATCGCGCTC
GTCGTCGCCG ACACCGCGGG GAAATGGCCG TACCTGGAGG AGCTGACGAC GGATTTCCTG
TACGTCCGGC TCCACGGAGA CACGGAGATG TACACCAGCG GGTACACCCC CGCCGCCCTC
ACCACCTGGG CGGGCAGGAT CGAACGCTGG CGGGACCGCG GTCTCGACGT CTACGTGTAC
TTCGACAACG ACACACATGC GAAAGCGCCC GGCGACGCCA TGGCGTTGGC CGATGAACTC
GGCCTCCACC ACTCGCCGCC GGGCGCGGAG TCGAGGGAGT GA
 
Protein sequence
MDGSDHRRRE RVHPRTTRPR GSRGDGVIPH ARSEVRVGTS GWVYANWRGV FYPKDLRRGH 
ELEYLSRRLN TVEINGSFYS LQRPQRYLRW KAATPDDFRF AVKGSRFITH MKQLHDVDSA
LANFFASGVL ALEEKLGPIL WQLPPRLAFD PDRLASFLDR LPRSTGGAAA LARHHDDKVT
FEPHTDVETD RPLRYALEAR HPSFADPRCL ALLRTHDIAL VVADTAGKWP YLEELTTDFL
YVRLHGDTEM YTSGYTPAAL TTWAGRIERW RDRGLDVYVY FDNDTHAKAP GDAMALADEL
GLHHSPPGAE SRE