Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34350 |
Symbol | |
ID | 8388759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3739974 |
End bp | 3740867 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977457 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component |
Protein accession | YP_003135226 |
Protein GI | 257057394 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGACG AGCGCCCCAC ACCGGAAACC GAGATACTCC GAATCGGTGT GGGTAATGCC GTGGAAACCG CGCCACTGCG CCTGGCCGTA TCCGAGGGAC TGTTCCACCG CGAGGGCCTG CGGGTGGAGC TCACGGAGTT CTCCACCAAG GACGACGCGA TGGAACAGCT GTTAAACGGC GAGGTGGACG TCACCTTCGC CAGCAACGTC GATCTGCTCG CGGCGGCAGC CGAAGGCACG AAGATCCGAC TGCAGGGGGA GGCGTACATC GCCGGGTCCG GCTCGATGGC ACTGGTGACC TTGCCCGAAT CCCAATACAC GGACCTCGGC GATTTGCCGG TTCCCCGAAT CGCGGTGCCG GCCCCGAACG GACTCGGGAC GTTGACGACA CGCTCGGTTC TCGAGTCCGC GGGCATCGAC CCGGACAAGA TCATTTTTGA AGTGGTGCCG TTCGAACGAA TGGTGGAGGC GTTACGTTCC CGACGCGTGG ACGCGGCCTG GATGACCGAG CCGTATCTGG CCACCGTGCA GAAGGAACAC GGCGCCCGGG TGCTGGCCGA CTGCGCCCAT GGCGCCACGG AGAATTTCCC GATGTCGGCG TACGCGACCA CCGAGGAATT CGCCACTCGG AATCCGCGGA CCCTGGAACT GTTCCGCAAG TCGTTGGAGA CGGCGCAGCA ACAAGGGGTG GACACCGGCA CCATCCGCCG AGCGCTGCCC CGGCTGGCGG ACCTGGACGA GGTCACGGCA GCCCTGGTGT CCTTGGAGGG CACTTACCCG CACTCCGCCA ACGCCGAACG GCTACAGCGG GTCGCCGACC TCATGCACGG CGCCGGGCTG CTCTCCCAGC GCCTCGACGT GGCCTCGCTC GTACCGGAAC AGGAACTCTC CTGA
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Protein sequence | MDDERPTPET EILRIGVGNA VETAPLRLAV SEGLFHREGL RVELTEFSTK DDAMEQLLNG EVDVTFASNV DLLAAAAEGT KIRLQGEAYI AGSGSMALVT LPESQYTDLG DLPVPRIAVP APNGLGTLTT RSVLESAGID PDKIIFEVVP FERMVEALRS RRVDAAWMTE PYLATVQKEH GARVLADCAH GATENFPMSA YATTEEFATR NPRTLELFRK SLETAQQQGV DTGTIRRALP RLADLDEVTA ALVSLEGTYP HSANAERLQR VADLMHGAGL LSQRLDVASL VPEQELS
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