| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34280 |
|---|
| Symbol | |
|---|
| ID | 8388752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3729176 |
|---|
| End bp | 3729631 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135219 |
|---|
| Protein GI | 257057387 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACACGCG CGGGTTCAGC GCATCCGGGT ACGCCGAAGA AAGGCAGTTC CGGGCAGCAA
GGCAGCTTCG CTTGGCTCAT CACCGACTTC GTGCACCGGG TTCCCGGTGC AGCGCACGCC
GTTGTCGTCT CGGCGGACGG GTTGTTACTG GCGGCTTCGC GTGGCCTGCC CAAGGACAGG
GCCGACCAGC TCGCCGCTGT GGCATCGGGC CTGACGAGCC TGGCGCGGGG TGCCGCGCAG
GTGTTCGAGG GTGGTCCCGT GGCGCAGACC GTCGTCGAGA TGGCCAACGG CTTTTTGTTC
CTGATGTCGA TTTCCGATGG GTCCTGTCTG GCCGTGCTCG GCGCTCCCGA CAGCGACATC
GGGCTGGTCG TCTACGAGAT GACGTTGTTG GTCGATCGGG TCGGAAAGCA GATGACACCG
GAGTTGCGGG CCCAGTTGCA GGGTTCGCGT CGGTGA
|
|---|
| Protein sequence | MTRAGSAHPG TPKKGSSGQQ GSFAWLITDF VHRVPGAAHA VVVSADGLLL AASRGLPKDR
ADQLAAVASG LTSLARGAAQ VFEGGPVAQT VVEMANGFLF LMSISDGSCL AVLGAPDSDI
GLVVYEMTLL VDRVGKQMTP ELRAQLQGSR R
|
|---|
| |