Gene Svir_34260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34260 
Symbol 
ID8388750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3727716 
End bp3728303 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content65% 
IMG OID644977448 
Productpredicted GTPase 
Protein accessionYP_003135217 
Protein GI257057385 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.63353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCTG CCACGCCGGC GACGTCAGGC CCGACCCAGT CGGCCAAGAT CGTGGTCGCC 
GGTGGTTTCG GTGTCGGTAA GACAACGCTC GTGGGAGCGG TGTCCGAGAT CGACCCGCTG
ACCACCGAGG CGTCCATGAC CGAGGCGAGC GTCTCTGTCG ACGACCTGTC GCAGACGCCG
AACAAGATGA CCACCACGGT CGCGATGGAC TTCGGCAGGA TCACGCTCGA CTCCGACCTG
GTCCTCTACA TTTTCGGCAC CCCGGGACAG CACCGGTTCT GGTTCATGTG GGACGACCTC
GCCTACGGTG CGATCGGTGC CGTGGTGCTG GTGGACACCA GGAGATTGGC CGACGCGTTC
CCGTCGATCG ACTTCTTCGA GAACCGCAGG CTGCCCTACA TCGTGGCGAT CAACTGCTTC
GACCGACTGC TGCACCACCA GATCGAGGAC GTGCGGCACG CGCTCACCAT CTCGCCGTCG
GTGCCGATCA TGGCCTGTGA CGCGCGGGAT CGCGAGTCCG CCAAGCAGGT GCTCATCTCC
ATCGTGCAGC ACGCGATCGC CCACGACACG GCATTGCGGG CGGGGTGA
 
Protein sequence
MSAATPATSG PTQSAKIVVA GGFGVGKTTL VGAVSEIDPL TTEASMTEAS VSVDDLSQTP 
NKMTTTVAMD FGRITLDSDL VLYIFGTPGQ HRFWFMWDDL AYGAIGAVVL VDTRRLADAF
PSIDFFENRR LPYIVAINCF DRLLHHQIED VRHALTISPS VPIMACDARD RESAKQVLIS
IVQHAIAHDT ALRAG