Gene Svir_34090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34090 
Symbol 
ID8388733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3712365 
End bp3712736 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content66% 
IMG OID644977431 
Productpredicted membrane protein 
Protein accessionYP_003135200 
Protein GI257057368 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.237199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGCCC TGTTGAACGT GATCTGGCTG GTGTTGTCCG GGATCTGGCT CGCGCTCGCC 
TATGCCGTCG CCGGGATCGT CTGCTGCATC CTCGTCATCA CGATCCCGTT CGGGATCGCG
TCGTTCCGCA TCGCGGCCTA CGCACTGTGG CCGTTCGGTC GCACCGTGAC CGAACGGCGA
TCCGCCGGTA TCCCGTCGCT GCTGGGCAAC ATCGTCTGGT TCCTCGTCGC GGGCTGGTGG
ATCGCACTCA CCCACGCCGT CACCGGAATC CTGCTGTGCC TCACGATCGT CGGCATCCCG
CTGGGGATCG GGAACTTCAA ACTGGTCCCG GTCGCGTTGC TGCCCTTGGG CAGGCGGATC
GTGTCGACCT GA
 
Protein sequence
MRALLNVIWL VLSGIWLALA YAVAGIVCCI LVITIPFGIA SFRIAAYALW PFGRTVTERR 
SAGIPSLLGN IVWFLVAGWW IALTHAVTGI LLCLTIVGIP LGIGNFKLVP VALLPLGRRI
VST