| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34070 |
|---|
| Symbol | |
|---|
| ID | 8388731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3709613 |
|---|
| End bp | 3710599 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977429 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_003135198 |
|---|
| Protein GI | 257057366 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCA TGACCGGCAC CGTCGAGCAT CGAGCTGGTT TTCATTCCCT GCGTCGTGGA
GGGCTGGACT GGAACACCCT GCCGCTGCGA CTGTTCGCCA AGGGCAACCG CAAGTTCTGG
GACCCGGCCG ACATCGACTT CAGTGTCGAC GCCCGGGACT GGGAGAAGTT GACCGACAGA
CAGCGGTTGT CGGCGACGTA CCTGTGCGCG CAGTTCGCGG CCGGTGAGGA AGCCGTCACA
GAGGACATCC AGCCGTTTCT GCGGGCGATG GCCGCCGAGG GCCGGTTGGG CGACGAGATG
TACCTGGCGC AGTTCTGCTT CGAGGAGGCC AAACACACCG AGGCGTTCCG GCGGTGGATG
GACGCCGTGG GACTGACCGA CGACCTGCAC CCGTTCGTGG CGGAGAACCC GCACTACCGG
AAGCTGTTCT ACGAGGAGCT GCCCGAATCG CTCGGGGTGC TGGCCGAGGA CCCCAGCCCC
CGCAACCAGG TGCGGGCCAG TGTGACGTAC AACCACGTCA TCGAGGGCTC ACTGGCGTTG
ACGGGCTACT ACGCGTGGCA GAAGCTGTGC GTCAGTCGTG GCATCCTGCC GGGCATGCGG
GAGCTCGTGC GACGTGTCTC GGACGACGAG CGCAGGCACA TGGCGTGGGG GACGTTCACC
TGCCGTCGCC ACGTGGCCGC CGACGACTCA CTGTGGGAGG TCGTACAGCA GCGCATGGAC
GAGCTGCTGC CACACGCCCT CGGCATGATC GAATGGGTCA ACCGGCAGTT CGACGAGTCC
TCCGACGGGG ACAACGCCGA GTTCGTACGC TACGCGGCCG ATCGCGCCCA ACGCAGACTG
AGCGCGATCG CCGCTGCACG GGGCGCGAAC GTCGCCGACA TCGACCTCGA CCACTCGCCC
GAACGGCTCG AGGAGACCTT CGGCGAGGAG GATGAACGAG CGTTCGCCGA GGCCGAGCGC
ATGGCCGGAC GCGAGTGGAC GAGGTGA
|
|---|
| Protein sequence | MSVMTGTVEH RAGFHSLRRG GLDWNTLPLR LFAKGNRKFW DPADIDFSVD ARDWEKLTDR
QRLSATYLCA QFAAGEEAVT EDIQPFLRAM AAEGRLGDEM YLAQFCFEEA KHTEAFRRWM
DAVGLTDDLH PFVAENPHYR KLFYEELPES LGVLAEDPSP RNQVRASVTY NHVIEGSLAL
TGYYAWQKLC VSRGILPGMR ELVRRVSDDE RRHMAWGTFT CRRHVAADDS LWEVVQQRMD
ELLPHALGMI EWVNRQFDES SDGDNAEFVR YAADRAQRRL SAIAAARGAN VADIDLDHSP
ERLEETFGEE DERAFAEAER MAGREWTR
|
|---|
| |