| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33970 |
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| Symbol | |
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| ID | 8388721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3698764 |
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| End bp | 3700230 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644977419 |
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| Product | permease |
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| Protein accession | YP_003135188 |
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| Protein GI | 257057356 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2252] Permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.114648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.793617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATG TGACCGCGCG GGAGCAGCGG TCGCCGATCG ATCGGTTCTT CCGGATCAGC
GAGCGAGGTT CCACCGTCGG CCGAGAAGTG CGCGGGGGCG TGGTCACGTT CGTGACCATG
GCCTACATCA TCGTGCTCAA TCCGCTCATC CTCGGTAGCT ACTCGGCGGA TGACCCCAGT
GCGGCCAAGG ACGTGACGGG GGCGATCCTG CCCGTCGACC AGGTCACGGC CGTCACCGCC
CTGGTCGCGG GTGTGATGAC CATCCTCATG GGGGTGGTCG CGAACTTCCC GTTCGCGATC
GCGGCCGGCT TGGGGCTCAA CACGCTCGTC GCGGTGTCCT TGGCCCCGAT GATGACGTGG
CCCGCGGTGA TGGGGCTCGT ATTGGTCAAC GGCATCGTGG TGCTGCTGTT GGTGGTCACC
GGCGTGCGCA CGATGGTGTT CAACGCGGTA CCGCAGCCGC TCAAGGGCAG TATCGCCGTC
GGCATCGGCC TGTTCATCGC GTTGGTGGGC CTGGTCGACG CCGGGTTCGT ACGCCGGGTC
CCGGACGCGG CGGGTACGAC GGTCCCCGTG CAGTTGGGGA TCGACGGATC GATCGCCTCG
TGGCCCACGA TGGTGTTCGT GGTGACGCTC GTGGTCATGG GCATCCTCGT GGCCAGGAAC
GTCAAGGGGG CGATCCTGCT CGGCATCCTG TTCGGCACGG TGCTGTCGAT CGTCATCGAG
GCCATCGTCA AGGCGGGGCC GTCCCTCGGG GTCGACCCGA AGGGCTGGAA CCTCGGTTAC
CCCGCCTTGC CCGACGCGAT CTTCAGTCTG CCCGACCTCT CCCTGGTGGG GGCCTTCAAC
TTCGACGCGT GGGTGCAGAT CCCGGCGCTG ACGGCGGCGC TGCTGGTGTT CACCCTCGTG
CTGACCGACT TCTTCGACAC CATCGGCACC ATGACCGGTC TGGGTCAGGA GGCGCGGCTG
ACGGACAAGG AAGGGCGGCT GCCCAACGTG GGCAAGGGCC TGTTCATCGA CTCGCTCGGT
GCCGTCGCCG GTGGTGCGGC CTCGTCGAGC TCCAACACGG TGTTCGTGGA ATCGGCCGCG
GGGATCGGGG AAGGCGCGCG TACCGGCCTG GCGAACGTCG TCACGGGGCT GTTGTTCATC
GCGGCCATGT TCTTCACACC GCTGTACCAG GTGGTGCCGA TCGAGGCGGC GGCGCCCGCT
CTGGTCATCG TCGGCGCGAT GATGGTCCGG CAGATCACCG AGATCGACTT CCGGGACTTC
GCGGTGGCGT TGCCCGCGTT CTTGACCATC GTGGTCATGC CGTTCACGTA CTCGATCGCC
AACGGCATCG GCGCGGGTTT CGTCAGCTAC GTGATCATCC AGGCGGTCAC CGGTAAGGCC
CGTCAGGTGC ACCCGCTGAT GTGGATCGTG TCGGCGGCGT TCATCGTGTA CTTCGCGATC
GACCCGATTC AGAGCACGCT CAACTAG
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| Protein sequence | MSDVTAREQR SPIDRFFRIS ERGSTVGREV RGGVVTFVTM AYIIVLNPLI LGSYSADDPS
AAKDVTGAIL PVDQVTAVTA LVAGVMTILM GVVANFPFAI AAGLGLNTLV AVSLAPMMTW
PAVMGLVLVN GIVVLLLVVT GVRTMVFNAV PQPLKGSIAV GIGLFIALVG LVDAGFVRRV
PDAAGTTVPV QLGIDGSIAS WPTMVFVVTL VVMGILVARN VKGAILLGIL FGTVLSIVIE
AIVKAGPSLG VDPKGWNLGY PALPDAIFSL PDLSLVGAFN FDAWVQIPAL TAALLVFTLV
LTDFFDTIGT MTGLGQEARL TDKEGRLPNV GKGLFIDSLG AVAGGAASSS SNTVFVESAA
GIGEGARTGL ANVVTGLLFI AAMFFTPLYQ VVPIEAAAPA LVIVGAMMVR QITEIDFRDF
AVALPAFLTI VVMPFTYSIA NGIGAGFVSY VIIQAVTGKA RQVHPLMWIV SAAFIVYFAI
DPIQSTLN
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