Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33960 |
Symbol | |
ID | 8388720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3697877 |
End bp | 3698311 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644977418 |
Product | transcriptional regulator |
Protein accession | YP_003135187 |
Protein GI | 257057355 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.064506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.816591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGAAG CCGCTGATGA ACGGTCGCTG GCCAGCCGCC TCAGGTTGGC GGTTGTTCGG CTGAACCGCA GGTTAAGGGC ACAAAGGGCC GATAACGAGG TTTCGCTGAC GCAGATCTCG GCTTTGTCCT CGCTATACAA ATGCGGTCCG ATGACGCCCG GGCAGTTGGC CGCCCGGGAA GGGGTGCAGC CGCCGTCGAT GACACGTGTC ATCGCGGCGC TGGAGGGTCT TGAGTACGTC GAGCGCAGCC CGCATCCCAC CGACGGTAGG CAGGCGATCG TCACCCTGAC CAAGGAAGGC CAGGACTACG TGCGGACCAC GATCTCCCGG CGGGAGATGT GGCTGGATCA GCGGTTGGCC GAACTGACCG ACGAAGAACG TCGGGTGCTC TCCAAGGCGG CCGAAATCAT CGAGCGCATG GCCAGACACA ACTGA
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Protein sequence | MSEAADERSL ASRLRLAVVR LNRRLRAQRA DNEVSLTQIS ALSSLYKCGP MTPGQLAARE GVQPPSMTRV IAALEGLEYV ERSPHPTDGR QAIVTLTKEG QDYVRTTISR REMWLDQRLA ELTDEERRVL SKAAEIIERM ARHN
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