Gene Svir_33960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33960 
Symbol 
ID8388720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3697877 
End bp3698311 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID644977418 
Producttranscriptional regulator 
Protein accessionYP_003135187 
Protein GI257057355 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.064506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.816591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGAAG CCGCTGATGA ACGGTCGCTG GCCAGCCGCC TCAGGTTGGC GGTTGTTCGG 
CTGAACCGCA GGTTAAGGGC ACAAAGGGCC GATAACGAGG TTTCGCTGAC GCAGATCTCG
GCTTTGTCCT CGCTATACAA ATGCGGTCCG ATGACGCCCG GGCAGTTGGC CGCCCGGGAA
GGGGTGCAGC CGCCGTCGAT GACACGTGTC ATCGCGGCGC TGGAGGGTCT TGAGTACGTC
GAGCGCAGCC CGCATCCCAC CGACGGTAGG CAGGCGATCG TCACCCTGAC CAAGGAAGGC
CAGGACTACG TGCGGACCAC GATCTCCCGG CGGGAGATGT GGCTGGATCA GCGGTTGGCC
GAACTGACCG ACGAAGAACG TCGGGTGCTC TCCAAGGCGG CCGAAATCAT CGAGCGCATG
GCCAGACACA ACTGA
 
Protein sequence
MSEAADERSL ASRLRLAVVR LNRRLRAQRA DNEVSLTQIS ALSSLYKCGP MTPGQLAARE 
GVQPPSMTRV IAALEGLEYV ERSPHPTDGR QAIVTLTKEG QDYVRTTISR REMWLDQRLA
ELTDEERRVL SKAAEIIERM ARHN