| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33900 |
|---|
| Symbol | |
|---|
| ID | 8388714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3691266 |
|---|
| End bp | 3692207 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977412 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_003135181 |
|---|
| Protein GI | 257057349 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCA CTAATCCAGA CCCACTCCAC GTCGTGGTCA CGGGAGGCTG CGGCTTCATC
GGACGCGCGG TCGTCGCCGC GTTCCGGCGC CGTGGTGCGC GAGTGACGGT CGTGGACCGG
GAACCGCTGT CGGTCCACGA TGCGGGGGTC GTCGCCGTCC AGGGGGAGCT GACCGACCCC
GAGGTGCGGG AGCGTGCCGT GGTGCCCGGG GTCGACGGGA TCATCCATCT CGCCGCCGTG
ACGTCCGTGC TGCGCTCGGT GGAGATGCCC GCGAAGACGT ACACCGAGAA CGTGGCCGTC
ACCCATGAGC TGCTGGAACT GGCGCGGATA CACGGCGTGC CCCGGTTCCT CATGGCGTCC
ACCAACGCCG TGGTCGGTGA CGTGGGCACC ACGACCATCA CCGAGGACAC GGCGTTGCGG
CCGCTCACCC CCTACGGCGC CACCAAGGCG GCGTGCGAGA TGCTGCTGTC CGGTTACGCG
GGCGCCTACG GCATGGCCAC GTGTGCGCTG CGGTTCACCA ACGTCTACGG GCCCGGCATG
AGCCACAAGG ACAGCTTCGT GCCCCGGCTC ATGCGGGCGG CGCTGAACGA CAGCGGGGTC
AAGGTCTACG GCGACGGCAA ACAGCGGCGT GACCTGGTGT TCATCGACGA CGTCGTACGG
GGCGTCGAAC TCGCGTGGGA CCGTCGACAC GTGGGCAGGG CCATCATCGG CGCGGGTCGC
TCCGTGTCCG TCCTCGAGTT GATCGACACG GTTCGCGAGG TCACCGGTCG GCCCATCCCC
GCCGAGCACG TCCCCGCACC GGGTGGTGAG ATGCCTGCGG TGGTCGTCGA CGTCTCCCGC
AGCGCCGAGA CCATCGGCTA CCGCCCGGCG TACAGCCTGC GGGACGGACT GGCCGCCACC
TGGCGGTACT TCCTCGACCA CCACAGGCAG AAAGTGTCCT GA
|
|---|
| Protein sequence | MAPTNPDPLH VVVTGGCGFI GRAVVAAFRR RGARVTVVDR EPLSVHDAGV VAVQGELTDP
EVRERAVVPG VDGIIHLAAV TSVLRSVEMP AKTYTENVAV THELLELARI HGVPRFLMAS
TNAVVGDVGT TTITEDTALR PLTPYGATKA ACEMLLSGYA GAYGMATCAL RFTNVYGPGM
SHKDSFVPRL MRAALNDSGV KVYGDGKQRR DLVFIDDVVR GVELAWDRRH VGRAIIGAGR
SVSVLELIDT VREVTGRPIP AEHVPAPGGE MPAVVVDVSR SAETIGYRPA YSLRDGLAAT
WRYFLDHHRQ KVS
|
|---|
| |