Gene Svir_33870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33870 
Symbol 
ID8388711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3686152 
End bp3686994 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID644977409 
Producthypothetical protein 
Protein accessionYP_003135178 
Protein GI257057346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.823039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGGGT TACACGAGGA CGGCACGTCC ATCGTGTGCG AAGACCCGGA GCGGCGTGAA 
CGGTTCCTCC TGCCCGCGGA CGAGCGGCTG CGTGCGGCCG CTCGTGGTGA CATCGCTCGG
CTCGGCCAGC TCGAGATCGA GCAGGAATAC ACGATGCGGC CACGCGAGAT CCAGTCCCGG
ATCAGGGCCG GGGCGTCCGT AGAGGAGGTC GCGTCGATTG CGGGTATGCC CGCAGCCCGC
GTCGAGCGGT TCGCCTATCC GGTGCTGCTG GAGCGGTCCC GCATCGCTGA ACTCGCACAA
CAGGCGCACC CCGTCCGGGA GGACGGTCCC GACGTGCGGA CCCTCGGCGA GATCGTCGCG
CATTCCTTCG CGCGGCGAGG GCACGACTAC ACACAGGCGA GTTGGGATGC GTGGCGGTCG
GAAGAGGGCA AGTGGATCGT CGGGCTGTCC TGGTCCGCGG GGCGCTCGGA CAACCGCGCG
CGCTGGGTGT ACTCCCCCGG CGCCCACGGT GGCACGGTGA CGGCGCTGAA CGAGTTGGCC
GAGGCGCTGC TCGACCCGGA TTCGTACCGG GCTCCCCGGG CTGTCGGCCG GCGGGGTGGG
TCAGCGTACG GCATCGGTCT GCCGCCCTTC GGCCGAGAGG GCGCCACGGT GATCGAGGCG
CCGATCCCCG CCGGTGACCG TGATCGTTTC GAGCGCGACA CCGCTGGTGA GCACGACGAC
AGCGAGCTGG TGCCGGAACA AGCCGCATCC GGTGACTCCA CTCGCAGCAA GTCGAAGAAG
GGGCACCCCA CCGTGCCGGC ATGGGAGGAC GTCCTCCTGG GAGTGCGCAG CCAACGAGGC
TGA
 
Protein sequence
MVGLHEDGTS IVCEDPERRE RFLLPADERL RAAARGDIAR LGQLEIEQEY TMRPREIQSR 
IRAGASVEEV ASIAGMPAAR VERFAYPVLL ERSRIAELAQ QAHPVREDGP DVRTLGEIVA
HSFARRGHDY TQASWDAWRS EEGKWIVGLS WSAGRSDNRA RWVYSPGAHG GTVTALNELA
EALLDPDSYR APRAVGRRGG SAYGIGLPPF GREGATVIEA PIPAGDRDRF ERDTAGEHDD
SELVPEQAAS GDSTRSKSKK GHPTVPAWED VLLGVRSQRG