Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33750 |
Symbol | |
ID | 8388699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3669172 |
End bp | 3670851 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977397 |
Product | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha |
Protein accession | YP_003135166 |
Protein GI | 257057334 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCGG AAGAGCCCTG GCTGCGCTGT TCGGGATGCG GCAGCTTGCT GTACCGCAAA CGCTTCGTAC GGCTCCACCG AGTGTGCCCG GACTGCGGTG CCCACGCTCG GCTCACCGCT CGGCAACGGA TCGCCCAGTT GCTCGATCCG GGCAGTGCGC GGGAGATTCC GGTACCACCC ACCGTGGTGG ACCCCTTGCG GTTCATCGAC TCACGTCCGT ATCCGCAACG GTTGGCGGAA GCCCGACGGG CCACCGGCGA GGACGACGCC GTCGTCGTGG TGACCGGCAG CATCGGTGGC CGTCCCCTGG TGATGGCGGT GATGGACTTC GGCTTCCTCG GCGGCAGTCT CGGCGTGGCC GCGGGCGAAG CCGTGACCTG CGCCGCCGAA CTGGCGTTAC GTGACTCGCT GCCACTGCTG TTGGTCACGT CCTCGGGTGG TGCGCGCATG CAGGAGGGGG TGCTGTCCCT CATGCAGATG GCCAAGACCG CACAGGCGAT GGCCGCGCTG GACGAGGCCG GTCTGCTGAC GATCACCCTG GTGACCGATC CCACCTACGG AGGGGTCGCC GCTTCGTTCG CGACCCTGTC GGACGTCCTG CTGGCGGAAC CGAAAGCCCG CATGGGGTTC GCGGGACCAC GCGTGATCAA GCAGACGATC AACCAGGAAC TCCCCGAAGG CTTCCAGACC GCGGAGTTCC TCCGGGACCG AGGTCTCATC GACGGCGTCT ATCCCCGTGC CGAACTCCGC GAGGTGCTGA CGCGGCTGCT GGACATCGCC CGGCCGGACG TGCGGCTGTC GGCCGACCTG GAAAGCGGTC GGCAGTGGCT CGTCCACGAC CCGGAGCAAC TTGAGCACAG GTCCGCATGG GACACCGTGC GACGAGCCCG AGCCCCGGAA CGACTGACCG CGCTGGAACA CATCCGGCTG TGGACGAGCG GGTTCGTCGA GTTACTCGGC TCCCGGTGCG GTTCCGACTC CCCCGCCCTC GTCGGCGGGG TCGGTCTGTT GGCGGGACAA CCGGTGCTGC TACTCGGACA GCAGAAAGGC CACGACACCC ACGAACTCGT CCGGCGTGAT TTCGGGATGG TGACCGCCGA CGGGTATCGC AAGGCACTGC GGCTGATGCG GTTGGCGAGC AAACTACGCC TCCCGGTCAT ATCGCTGATC GACACCCCCG GCGCGCATCC CGGTCTGGAG TCCGAGGAGA CGGGACAGGC CGGGGCCATC GCCGCCTGCA TCGCCGAACT GGGCACTCTG CCGGTACCGG TGATCTCCGT CGTCACGGGG GAGGGCGGAA GCGGTGGTGC CCTGGCATTG GCCGTCGGTG ACCGGGTGCT GCTGTCGGAA CATGCCGTCT ATTCCGTCAT CAGCGCCGAA GGCTGCGCGG CGATCCTCTG GAAGACGGCC GAGGCCGCTC CGAAGGCCGC GGCCGCGCTG CAACTGGACG CCCCCTCGTT GCTGCGTCAC GGGATCGTCG ACGCCGTGGT GCGGGAGCCG GGCGCCGGAG CCCACACCGA CCCGATGGAG GCCAGTATCC GGCTACGGGA CGCGGTGCTG ACGACATTGA GCGAACTGCT GCCACTTCCG GGGCCGCGCC TCGTCCGGGA ACGACGAGCC CGGTTCCGAC GGTACGGCCG GCTGCAAGCG ACAGCCCTAT CGGAGGGAAG GCAACGATGA
|
Protein sequence | MPAEEPWLRC SGCGSLLYRK RFVRLHRVCP DCGAHARLTA RQRIAQLLDP GSAREIPVPP TVVDPLRFID SRPYPQRLAE ARRATGEDDA VVVVTGSIGG RPLVMAVMDF GFLGGSLGVA AGEAVTCAAE LALRDSLPLL LVTSSGGARM QEGVLSLMQM AKTAQAMAAL DEAGLLTITL VTDPTYGGVA ASFATLSDVL LAEPKARMGF AGPRVIKQTI NQELPEGFQT AEFLRDRGLI DGVYPRAELR EVLTRLLDIA RPDVRLSADL ESGRQWLVHD PEQLEHRSAW DTVRRARAPE RLTALEHIRL WTSGFVELLG SRCGSDSPAL VGGVGLLAGQ PVLLLGQQKG HDTHELVRRD FGMVTADGYR KALRLMRLAS KLRLPVISLI DTPGAHPGLE SEETGQAGAI AACIAELGTL PVPVISVVTG EGGSGGALAL AVGDRVLLSE HAVYSVISAE GCAAILWKTA EAAPKAAAAL QLDAPSLLRH GIVDAVVREP GAGAHTDPME ASIRLRDAVL TTLSELLPLP GPRLVRERRA RFRRYGRLQA TALSEGRQR
|
| |