Gene Svir_33750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33750 
Symbol 
ID8388699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3669172 
End bp3670851 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content69% 
IMG OID644977397 
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_003135166 
Protein GI257057334 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGG AAGAGCCCTG GCTGCGCTGT TCGGGATGCG GCAGCTTGCT GTACCGCAAA 
CGCTTCGTAC GGCTCCACCG AGTGTGCCCG GACTGCGGTG CCCACGCTCG GCTCACCGCT
CGGCAACGGA TCGCCCAGTT GCTCGATCCG GGCAGTGCGC GGGAGATTCC GGTACCACCC
ACCGTGGTGG ACCCCTTGCG GTTCATCGAC TCACGTCCGT ATCCGCAACG GTTGGCGGAA
GCCCGACGGG CCACCGGCGA GGACGACGCC GTCGTCGTGG TGACCGGCAG CATCGGTGGC
CGTCCCCTGG TGATGGCGGT GATGGACTTC GGCTTCCTCG GCGGCAGTCT CGGCGTGGCC
GCGGGCGAAG CCGTGACCTG CGCCGCCGAA CTGGCGTTAC GTGACTCGCT GCCACTGCTG
TTGGTCACGT CCTCGGGTGG TGCGCGCATG CAGGAGGGGG TGCTGTCCCT CATGCAGATG
GCCAAGACCG CACAGGCGAT GGCCGCGCTG GACGAGGCCG GTCTGCTGAC GATCACCCTG
GTGACCGATC CCACCTACGG AGGGGTCGCC GCTTCGTTCG CGACCCTGTC GGACGTCCTG
CTGGCGGAAC CGAAAGCCCG CATGGGGTTC GCGGGACCAC GCGTGATCAA GCAGACGATC
AACCAGGAAC TCCCCGAAGG CTTCCAGACC GCGGAGTTCC TCCGGGACCG AGGTCTCATC
GACGGCGTCT ATCCCCGTGC CGAACTCCGC GAGGTGCTGA CGCGGCTGCT GGACATCGCC
CGGCCGGACG TGCGGCTGTC GGCCGACCTG GAAAGCGGTC GGCAGTGGCT CGTCCACGAC
CCGGAGCAAC TTGAGCACAG GTCCGCATGG GACACCGTGC GACGAGCCCG AGCCCCGGAA
CGACTGACCG CGCTGGAACA CATCCGGCTG TGGACGAGCG GGTTCGTCGA GTTACTCGGC
TCCCGGTGCG GTTCCGACTC CCCCGCCCTC GTCGGCGGGG TCGGTCTGTT GGCGGGACAA
CCGGTGCTGC TACTCGGACA GCAGAAAGGC CACGACACCC ACGAACTCGT CCGGCGTGAT
TTCGGGATGG TGACCGCCGA CGGGTATCGC AAGGCACTGC GGCTGATGCG GTTGGCGAGC
AAACTACGCC TCCCGGTCAT ATCGCTGATC GACACCCCCG GCGCGCATCC CGGTCTGGAG
TCCGAGGAGA CGGGACAGGC CGGGGCCATC GCCGCCTGCA TCGCCGAACT GGGCACTCTG
CCGGTACCGG TGATCTCCGT CGTCACGGGG GAGGGCGGAA GCGGTGGTGC CCTGGCATTG
GCCGTCGGTG ACCGGGTGCT GCTGTCGGAA CATGCCGTCT ATTCCGTCAT CAGCGCCGAA
GGCTGCGCGG CGATCCTCTG GAAGACGGCC GAGGCCGCTC CGAAGGCCGC GGCCGCGCTG
CAACTGGACG CCCCCTCGTT GCTGCGTCAC GGGATCGTCG ACGCCGTGGT GCGGGAGCCG
GGCGCCGGAG CCCACACCGA CCCGATGGAG GCCAGTATCC GGCTACGGGA CGCGGTGCTG
ACGACATTGA GCGAACTGCT GCCACTTCCG GGGCCGCGCC TCGTCCGGGA ACGACGAGCC
CGGTTCCGAC GGTACGGCCG GCTGCAAGCG ACAGCCCTAT CGGAGGGAAG GCAACGATGA
 
Protein sequence
MPAEEPWLRC SGCGSLLYRK RFVRLHRVCP DCGAHARLTA RQRIAQLLDP GSAREIPVPP 
TVVDPLRFID SRPYPQRLAE ARRATGEDDA VVVVTGSIGG RPLVMAVMDF GFLGGSLGVA
AGEAVTCAAE LALRDSLPLL LVTSSGGARM QEGVLSLMQM AKTAQAMAAL DEAGLLTITL
VTDPTYGGVA ASFATLSDVL LAEPKARMGF AGPRVIKQTI NQELPEGFQT AEFLRDRGLI
DGVYPRAELR EVLTRLLDIA RPDVRLSADL ESGRQWLVHD PEQLEHRSAW DTVRRARAPE
RLTALEHIRL WTSGFVELLG SRCGSDSPAL VGGVGLLAGQ PVLLLGQQKG HDTHELVRRD
FGMVTADGYR KALRLMRLAS KLRLPVISLI DTPGAHPGLE SEETGQAGAI AACIAELGTL
PVPVISVVTG EGGSGGALAL AVGDRVLLSE HAVYSVISAE GCAAILWKTA EAAPKAAAAL
QLDAPSLLRH GIVDAVVREP GAGAHTDPME ASIRLRDAVL TTLSELLPLP GPRLVRERRA
RFRRYGRLQA TALSEGRQR