| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33610 |
|---|
| Symbol | |
|---|
| ID | 8388685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3657742 |
|---|
| End bp | 3658665 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977383 |
|---|
| Product | sugar kinase, ribokinase |
|---|
| Protein accession | YP_003135152 |
|---|
| Protein GI | 257057320 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.469298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGTG GTGAAGCACT TGTCGATCTC GTCCCCGCAG GTGCGGGCGG GACTCTGTTG
GCTCCTCGTC TGGGCGGTGG CCCGTACAAC GTCGCTCTCG CGGCCGCCCG GCTCGGGATG
CCGACGGCGT TCTTCTCCCG GGTGTCGACC GACGCTTTCG GCGACGCCCT GCTCCGTCGG
CTGGAGGAGT CTGGAGTGGA CACGTCGTTG GTGCAACGTG GACCAGAGCC GACCATGCTC
GCTGTGGTGA CGTTGGACGA GGACTCCAAC GCCCACTACA GCTTCTACGC CGAGGGCACC
GCTGATCGAC TGGTCACCGA CCCGGGGCCG TTGCCCGACA GCACCGAGGT GCTGTCGGTG
GGCACGCTCG GTATGGCGCT GCAACCCTGC GCACAGGTGT ACGAGGCCAT GCTGCGTCGC
GAGAGTCAGC GGGGCGTGCT GACCGCGCTC GACCCCAACA TCCGAGCCGA CATGATCGCC
GATCCGGACG ACTACCGAGC CCGGTTCGCC TCCTGGTTGC CGTCCGTGCA TCTTGTGAAA
CTCTCGGTGG AGGACGCTCG GTGGCTCACC GGCGCCACCG ATCCGGACGA CATCATGGCA
GCCGCGCAAT CGTGGCTCGA CGAGGGACCT CAAGGTGTGG TCTTGACCAA AGGCGCCGAG
GGCATGTCGT TGATCACGTC TGCGGGCGTC GATGTGACAG TCCCCACTGC ACCGACGAAG
GTCGTGGACA CGGTCGGTGC CGGCGACACC GTGCAAGGCG CCGTCCTCGC GTGGCTGGTG
TGTAACCGGG TCAAAGACGT ATCAGTGCTG TCTGCGGGCG ATTGTCGCGA CATGTTGGAG
TTCGCGGCGG AGGCCGCGGC CGTCACCGTG TCGCGTAGCG GAGCGGAGCC CCCGACGGCG
GAAGAGCTTC GCAAAAGGGT GTGA
|
|---|
| Protein sequence | MSGGEALVDL VPAGAGGTLL APRLGGGPYN VALAAARLGM PTAFFSRVST DAFGDALLRR
LEESGVDTSL VQRGPEPTML AVVTLDEDSN AHYSFYAEGT ADRLVTDPGP LPDSTEVLSV
GTLGMALQPC AQVYEAMLRR ESQRGVLTAL DPNIRADMIA DPDDYRARFA SWLPSVHLVK
LSVEDARWLT GATDPDDIMA AAQSWLDEGP QGVVLTKGAE GMSLITSAGV DVTVPTAPTK
VVDTVGAGDT VQGAVLAWLV CNRVKDVSVL SAGDCRDMLE FAAEAAAVTV SRSGAEPPTA
EELRKRV
|
|---|
| |