Gene Svir_33460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33460 
Symbol 
ID8388670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3641465 
End bp3642739 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID644977368 
Producthypothetical protein 
Protein accessionYP_003135137 
Protein GI257057305 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.316123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCA CTACCGAGAC CAGCGGGGCG GATGCGACGA CCGCGCGGCG CCCGCTCGTG 
GAAAGCCGTA TGCGTTGGGC GGTCGAGATG CTCGCCGAGC CCGGACCAGG ACTCGCCGAG
GACCCCCGGG ACCACTTCGT CGCCGCCTTT GTGGACAAAC ACGGGGACGG GCTGTCCGCA
CTGCTGGATT CGTGGCGGGC GCAAGGCCCG TTCACCGTGG AGTCCTACAC CCCCGTGGCG
CACAAGGGGT GGGCCACGCT GATCGGTCCC ACCGGTGACC GCTTCACGTT GTCCATCGTG
ATCGACAGTT CCGGGCTCAT CCGCGGGCTG GGATTGGGGC CCGAGCTGGT GATACCGCCA
CTTCGTGACT GGGACGAACT CGACGCGGCA CTCGACGTCC CCGGGGTGAC CAGCACGGCG
TTGGTCGCCC GGCTGGTCGA CGATCGCTGG GTCAGCCTGT ACGAGCGGTC GCCGGATCGG
CTCATGCCCA CCGGGTCGGC CTACAAGCTC TACCTGCTGC GCGCGCTCGC CCGAGCGATC
GAGGCCGGGA CGGTGCGATG GGACGAGGAA CTCACCCTGC TCCCGCAGCT GCGTAGCCTG
CCGACGGGGG AGATGCAGGA TCTTCCCGAC GGCGCCCGGG CCACGGTGCG GGAGGTCGCG
CACAAGATGA TCGCGATGAG CGACAACACG GCCGCCGACA TGGTGCTGCA CCGGCTCGGC
CGGGACGCCG TGCACCGTGC CGTGGTGGAC TCGGGCCATC AGGATCCCGA CGTGTTGCGT
CCGTTCCTCA GCAGTCGTGA GCTGTTCGAG ATCGGCTGGG GCGATGATCC GTCGTTGTTG
CCGGAATGGT CCGCCGGGGA CCGGGCACAG CGGTACGAGT TGTTGCGACG CATCGAACGG
CCGCTGACCA CCCGGATGCG GGATCTGAAC CGTCCCGTGT ACCACCTGGG TTTGGACTGG
TTCCTCAGCG CCCGCGACGT GGCTAACGCG TTGGCCGGGG TGTGGCGGGA CACCACCCGG
GACCGCACCG GCACGATCCG CGAGATCGTC ACCACCTATC CGGGCGTGCC GATCGACGGG
GAACGCTGGC CCGTCGCGGT GTTCAAAGGA GGGTCCAGTC CCGGCGTGGT GATGTTCTGT
TGGTTGCTCG TCGATCCGGC CGGAGTGCCC CACGTCGTGG TGCTCCAGCA GTGCGGGGAG
GACCCCGGCC AGGTCGGTGA CGGCCTGCGG CTGCGTGGGC TCGGCGACCG GATCATCCAC
TCGTTGCTGC CGTGA
 
Protein sequence
MLTTTETSGA DATTARRPLV ESRMRWAVEM LAEPGPGLAE DPRDHFVAAF VDKHGDGLSA 
LLDSWRAQGP FTVESYTPVA HKGWATLIGP TGDRFTLSIV IDSSGLIRGL GLGPELVIPP
LRDWDELDAA LDVPGVTSTA LVARLVDDRW VSLYERSPDR LMPTGSAYKL YLLRALARAI
EAGTVRWDEE LTLLPQLRSL PTGEMQDLPD GARATVREVA HKMIAMSDNT AADMVLHRLG
RDAVHRAVVD SGHQDPDVLR PFLSSRELFE IGWGDDPSLL PEWSAGDRAQ RYELLRRIER
PLTTRMRDLN RPVYHLGLDW FLSARDVANA LAGVWRDTTR DRTGTIREIV TTYPGVPIDG
ERWPVAVFKG GSSPGVVMFC WLLVDPAGVP HVVVLQQCGE DPGQVGDGLR LRGLGDRIIH
SLLP