| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33370 |
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| Symbol | |
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| ID | 8388661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3629536 |
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| End bp | 3631206 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977359 |
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| Product | thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase |
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| Protein accession | YP_003135128 |
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| Protein GI | 257057296 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.519106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCA CCACTGCCAA ATTGTTGCTG TCCCGCCTCC GAGAGCACGG CGTGGAACAC
GTCTTCGGGA TCGTCGGCCG GGAGGCTGAA GCGATCCTGT TCGACGAGGT CGAGGGAATC
GATTTCATCC TCACCCGACA CGAGTTCACC GCCGGGATCA TGGCCGACGT ACTCGCTCGT
CTCACCAACC GGCCGCAGGC GTGCTTCGCG ACCCTCGGGC CTGGAGCCAC CAACCTGTCC
ACCGGTGTGG CGACCTCCGC ATTGGACCGC AGTGCCGTCA TCGCGCTGGC CGCGCAATCG
GAGTCGCACG ACATCTTCCC GAATGACACC CACCAGTGCG TCGACACCGT CGGGCTCATG
CGCCCGCTGA CGAAGTTCGC CGCGGAGCTC GCCCGCCCCG GCGACATCGT CGACCTGGTG
GACTCCGCCG TGTCGGCCGC CACCGTCGAA CCACTCGGTC CCAGTTTCCT CAGCCTCCCG
GTGAACCTGC TGAGCGCCGA GGTGGATGCC CCGAACACTC CGGCCGTCGT CTCCCCGCAG
TCCCCCCGGG GCGTTGTCGA TCCTAATTGG ACCAAGGAGT TGGACCGGGT CGTGCCGCTG
CTGGAGCAGG CCAAGCACCC GGTGCTCGTC GTGGGCAGTG CCACGATCCG GGCGGGCGCG
GTGGAGGCCC TGCGTGCCTT CGTCGACCGC ACCGGCATCC CGGTGATCAC CACTTACACG
GCCAAGGGTG TACTGCCGCA CGAACATCCG TTGAACTACG GCGCCGTGAG CGGGTACATG
GACGGCATCC TCGAATTCCC CGCCCTGGAC ACGCTCTTCG GCCCCGTGGA CCTGATCATC
GCGCTGGGTT ACGACTACGC CGAGGACCTC CGCCCGCCGA TGTGGGCCCA CGGTGTCCCC
AAGAAGGTCG TCCGCGTGGC CGCGACGCCG AACCCCATCC CCCGGGTGTT CCGCCCCGAT
GTCGACGTGG TCGTCGATCC GGCGAGCTTC CTCGCCGCCT TGGACCGGGC CACCACGGAC
ATGCCCACCA AACAGGCACA CGACATCCAA CCGCTGCGGG CGCGGATCGC GGAGCTGCTG
TCCGACTCCA AGGAGTACTC CGACGGCATG CGGGTACACC AGGTGATCGA CACGATGAAC
GCCGCACTCC CGCCCAACAG CACGTTCGTC AGCGACATCG GTTACTTCCG CCACTACGGC
GTGCTGTTCG CCAAGTCCGA CCAGCCCTAC GGATTCCTCA CTTCCGCGGG CTGCTCCAGC
TTCGGCTACG GACTGCCCGC CGCGATGGCG GCACAACTGG CCCGACCGGA CGACACGGTG
TTCCTGATCG CGGGGGACGG CGGGTTCCAC TCCAACAGCG CCGACCTGGA GACCGCCGCG
CGACTGAACC TGCCGGTCGT CATGGTGGTG GTGAACAACA GCCGCAACGG CCTGATCGAG
CTGTACCAGA ACAAGGGTCA CGGACGTTCG CACAATCCGG CCGTCGGATT CTCCAATGTG
GACTTCGTAC AGCTGGCCGA GGCCAACGGG GTCGAGGCGG TGCGCGCCAC CGACCGCAAG
AGCCTCGCCT CGGCACTGAG CAAGGGCCAG GAGCTGCGTC GGCCGTTCCT CATCGAGGTG
CCGATCACCT ACGAGTTCTC CGCGGACGGG TTCACCGCTT TGGACATCTG A
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| Protein sequence | MSSTTAKLLL SRLREHGVEH VFGIVGREAE AILFDEVEGI DFILTRHEFT AGIMADVLAR
LTNRPQACFA TLGPGATNLS TGVATSALDR SAVIALAAQS ESHDIFPNDT HQCVDTVGLM
RPLTKFAAEL ARPGDIVDLV DSAVSAATVE PLGPSFLSLP VNLLSAEVDA PNTPAVVSPQ
SPRGVVDPNW TKELDRVVPL LEQAKHPVLV VGSATIRAGA VEALRAFVDR TGIPVITTYT
AKGVLPHEHP LNYGAVSGYM DGILEFPALD TLFGPVDLII ALGYDYAEDL RPPMWAHGVP
KKVVRVAATP NPIPRVFRPD VDVVVDPASF LAALDRATTD MPTKQAHDIQ PLRARIAELL
SDSKEYSDGM RVHQVIDTMN AALPPNSTFV SDIGYFRHYG VLFAKSDQPY GFLTSAGCSS
FGYGLPAAMA AQLARPDDTV FLIAGDGGFH SNSADLETAA RLNLPVVMVV VNNSRNGLIE
LYQNKGHGRS HNPAVGFSNV DFVQLAEANG VEAVRATDRK SLASALSKGQ ELRRPFLIEV
PITYEFSADG FTALDI
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