| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33360 |
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| Symbol | |
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| ID | 8388660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3627641 |
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| End bp | 3629290 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977358 |
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| Product | ABC-type dipeptide transport system, periplasmic component |
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| Protein accession | YP_003135127 |
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| Protein GI | 257057295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.722475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.940695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTG AGCCCGGCCG GAACGCCGCG ATCACCAGCG TGGTTCGGCC GAGTGACGAG
ACGGGCGGAA CCCTGCGGCT GGCCCGCACC GACGACTTCG ACTCGCTGGA CCCCGGAAAC
ACCTACTACG CCTACACCTG GAACTTCCTC CGGTTCATCG GCCGCACCCT GGTCACCTTC
GACACCGCAC CCGGTAAGGC CGGGCAACGT CTGGTACCCG ACCTGGCCGA GTCGCTCGGC
GAATCCTCCG ACGGAGGGCG GACTTGGACC TATCGGCTGC GTGAAGGTCT CCGCTTCGAG
GACGGCAGTC CGGTGACCGC CGCCGACGTG AAATACGCGA TCGCCCGAAG CAACTACGGT
TCCGATGTCC TCGGCAGCGG CCCCATGTAC TTCCGGCACC TGCTCGGCAC CGACTATCAA
GGGCCGTGGC GGGAGCCGGA CGTCGACGGG CCGGTCACGT TGGAGACGCC GGACGAACGC
ACACTGGTGT TCCGACTGCA ACGCCCCTTC GCGGCGTTGG ACCTGCTCGC CACGATGCCG
AACACGACCC CCGTCCCACG TTCGGCGGAT ACGGGGGCCG ACTATCGACT GCGCCCGGTC
TCCACAGGGC CGTACCTGAT CGCACACTAC GAACCGGGCA AGCAGGCGGT GCTGGAACCG
AACCCGCACT GGGATCCGGC CACCGACCCG GTGCGCAAAC GTCGGGCCTC CCGGATCACG
GTCACGCTCG GCGTGGCCCC GCACGAGGTC GACGAGATGC TCTTGGACGG CCGGGCTCAC
GTGGACCTCG CGGGATTCGG TGTTCAACCG AGCACCCAGG AACGCATACT CGCCGACCCA
GTACTACGTT CCCGCACCGA CAATCCGCTC ACCGGGTTCA CGTGGATCTA CTGCATGTCC
AGCCGCATAC CCCCGTTCGA CAACATCCAC TGCCGTCGGG CCGTGCAGTA CGCGACCGAC
AAAGCAGCCA TGCAAAAGGC CTACGGTGGG CCGATCGGCG GCGACATCGC CACCACGATC
CTTCCGCCCA CTTTGGATGG TTATGAACCG TTCGACCGAT ATCCGGTCGG CGAGGACGGC
ACCGGGGACC TGGAAGCGGC TCGCGCCGAA CTGGCCGCGG CCGGGATGCC CGACGGGTTC
CGCACGAAGA TCGCAGCCAG AAAGGACCGA CTCAAGGAGT ACCGCGCCGC CGAGGCCCTC
GCCGCGGGTC TGGCCCGAGT GGGGATCGAG GCCGAGGTGT TGGACTTCCC CTCCGGCGAC
TACTTCGAAT CCTACGGAGG CTGCCCGGCC TACCTCCGGG AACACGGCAT CGGCATCATC
ATGTTCGGCT GGGGCGCCGA CTTCCCCGAC GGGTACGGCT TCCTGCAACA GATCCTGGAC
GGTCGGGCGA TCAAACCCCG AGGCAACCAG AACATGGGCG AGCTCGACGA TCCAGAGATC
AACGAATTGC TGGACGAGGG TGCCGCCTGT TCGGACCCGG TGCGACGCGC CCAGATTTGG
CACCGAATCG ACCGGCTCGC CATGGAGCAC GCGGTGATCG TGCCGTACCT GTACCCGCGC
TCCCTGCTCT ACCGAGCCCC GGAGACGCGC AACGTGCTCG TCACCGGTTC CTTCGGGATG
TACGACTACG TCGCGATGGG AGCGAGCTGA
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| Protein sequence | MDIEPGRNAA ITSVVRPSDE TGGTLRLART DDFDSLDPGN TYYAYTWNFL RFIGRTLVTF
DTAPGKAGQR LVPDLAESLG ESSDGGRTWT YRLREGLRFE DGSPVTAADV KYAIARSNYG
SDVLGSGPMY FRHLLGTDYQ GPWREPDVDG PVTLETPDER TLVFRLQRPF AALDLLATMP
NTTPVPRSAD TGADYRLRPV STGPYLIAHY EPGKQAVLEP NPHWDPATDP VRKRRASRIT
VTLGVAPHEV DEMLLDGRAH VDLAGFGVQP STQERILADP VLRSRTDNPL TGFTWIYCMS
SRIPPFDNIH CRRAVQYATD KAAMQKAYGG PIGGDIATTI LPPTLDGYEP FDRYPVGEDG
TGDLEAARAE LAAAGMPDGF RTKIAARKDR LKEYRAAEAL AAGLARVGIE AEVLDFPSGD
YFESYGGCPA YLREHGIGII MFGWGADFPD GYGFLQQILD GRAIKPRGNQ NMGELDDPEI
NELLDEGAAC SDPVRRAQIW HRIDRLAMEH AVIVPYLYPR SLLYRAPETR NVLVTGSFGM
YDYVAMGAS
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