Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33290 |
Symbol | |
ID | 8388653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3614178 |
End bp | 3615746 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644977351 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_003135120 |
Protein GI | 257057288 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.954815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCAG CGAACGTGGT CCCGGCTTCG TTGACGGCGC GGCGGCGGGC GATGGAACTC GACACGCTGG CATCGGGCGA ACGGGTGGAC GTGCTCGTGA TCGGCGGCGG GGTGACCGGA GCGGGAGCGG CGTTGGACGC GGCCTCCCGC GGCCTGTCGG TGGCCCTGAT CGAGGCCCGC GACCTCGCGT TCGGCACCTC ACGCTGGTCG AGCAAGCTCG TGCACGGCGG ACTCCGTTAC CTCGCCCACG GACACGTACG ACTGGCGCGG GAAAGCGCGG TCGAACGCGA CATCCTCATG CGACGGACGG CCCCGCACCT CACCCGGCCG ATGGCACAGC TCTTCCCGCG CTATGCGAAC ACACCGCAAA GCACCTACGC GCTCACCGTG GCCGGGGTCG GTGCGGGGGA CGCGCTGCGC AGGCTCGCGG GAACGCCCTC GTCGGTACTG CCCCGACCCC GATCGGTCCC CGCCGCCCAG GCACTGACCC TGGTGCCGGG ATTGCGGGAG ACGGGATTGC GCGGCGGTCT GCTGGCCTTC GACGGCACGC TGACCGACGA CGCCCGGCTC GTGGTGGCAC TCGCCCGGAC CGCGGCGGGA CTCGGCGCTC GCGTCCTCAC CCGGGTGCGG GCCCTCGACG TCGCGGCCGA CCGCGTCCGT GCGTGGGACG AACTGACGGG CCAGCCCGTC GAACTGCGCG CCCGCCAGGT GATCAACGCG ACGGGCGTAT GGGCGGAGGA ACTGGTGCCG AACGTCCGGT TGCGCCCCTC ACGGGGCTCG CATCTGGTGC TGGACGCCCG GGACACGGGG ATCGGGAAAA CGGCGCTCAT GGTGCCCGTT CCCGGCGAGA TCAATCGATT CGTGTTCCTC CTCCCCGCAC CGGGTGACAG GGTCTATCTC GGGCTGACCG ACGAACCGGT CGACGGTGTC CCCTCCGGAG ACCCCGAAGT TCCCGAATCC GATGTGGACT TCCTACTCGA CACGGCTTCA CGAGTGCTCG ACCGTCCGCT GACCCGGTCC GACGTGCTGG GCTCCTTCGC GGGATTGCGA CCGTTGCTCG ATTCCCCCGG GGACCGTACC GCCGATCTGT CCCGGGAACA CGCCGTGCTC ACCGATGACG ACACCGGCGT CATCACTGTC GTGGGCGGCA AACTCACCAC CTACCGGGTG ATGGCGCGTG ACGCCGTCGA CGCCGCGGTC CGAGCCTGTG GGCTCCGCGC TCAGGCGTCG AGAACGGCAC GGCTTCCCCT GGTCGGCGCC GCCCGTCGTT CGACTTTGGG CAACGTGGAG GCCCCGCGGC GGCTCGTCGC CAAGTACGGG ACCGAGGCGC CGAGAGTGGC CGCGCTGGGC GATGTCGACC CCGACCTCGC CCAGCCGCTG TTCCCCGGTT GCGACGTCAC CGCCGCCGAA GTCGTCTGGG CCGTACGGCA CGAAGGGGCC CTCGACGCGG ACGACGTACT GCACCGCCGC ACCCGGCTCG GACTGGTGGC CAAGGACGCC GAAACGGCTC GGCCGAAGGT GACCGAACTC GTCGAGAGGT CGCTGCGTGG TCTGTCCGAG TCGGGCTGA
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Protein sequence | MTPANVVPAS LTARRRAMEL DTLASGERVD VLVIGGGVTG AGAALDAASR GLSVALIEAR DLAFGTSRWS SKLVHGGLRY LAHGHVRLAR ESAVERDILM RRTAPHLTRP MAQLFPRYAN TPQSTYALTV AGVGAGDALR RLAGTPSSVL PRPRSVPAAQ ALTLVPGLRE TGLRGGLLAF DGTLTDDARL VVALARTAAG LGARVLTRVR ALDVAADRVR AWDELTGQPV ELRARQVINA TGVWAEELVP NVRLRPSRGS HLVLDARDTG IGKTALMVPV PGEINRFVFL LPAPGDRVYL GLTDEPVDGV PSGDPEVPES DVDFLLDTAS RVLDRPLTRS DVLGSFAGLR PLLDSPGDRT ADLSREHAVL TDDDTGVITV VGGKLTTYRV MARDAVDAAV RACGLRAQAS RTARLPLVGA ARRSTLGNVE APRRLVAKYG TEAPRVAALG DVDPDLAQPL FPGCDVTAAE VVWAVRHEGA LDADDVLHRR TRLGLVAKDA ETARPKVTEL VERSLRGLSE SG
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