| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33230 |
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| Symbol | |
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| ID | 8388647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3607037 |
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| End bp | 3608188 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977345 |
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| Product | isochorismate synthase family protein |
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| Protein accession | YP_003135114 |
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| Protein GI | 257057282 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.523116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGAC CCAGCCCCCT ACGGTTGCTG TCCGACTACC GCCGGGGTGA TTTCTTCCTC
GCCACCGCGG AACGCACGCT CCTGGGCACA GGGGCGCTGG CCACGGTGTG CGACGCCGAC
GAAAGTGTCC TCGCCGAACG GGTGCGGGAC ACGCTGGACG ACGTTTCCAC CGACGGCCCC
CCACTCGCCG TCGGTGTGCT CCCGTTCCAC AGCACCGCGG CCACCCCGGG CCGACTCGTG
GTCCCCACGA GGACCCGATT CGGCCGCGCC GTACACCCGG AGGCCGCCGC ACTTCCCCGA
CGAACCATCG ACGCCCCCGT CGCGGTGCGG CCGGTACCGG ACCCCGTCGA CCACATGGAC
GCCGTCACCG CGGCCGTCAC CGCCCTGGCC GAACGCGGAC TGCGCAAGGT GGTGCTGGCC
CGCGCGCTCG ACATCGAATT CGACGCGCCG GTGCGACCGG AGGCGATCCT GCACAACCTC
GTCAAGGACC ACGACCGCGG TTACACGTTC GCCGCTGAGC TCCCGGCGGG GAAGACCCTC
GTGGGCTCCA GCCCGGAGTT GCTGTTGTCC CGGCGCGGTA GGCACGTGGT GTCGTACCCA
CACGCCGGAT CGATGCCCCG CTCGACCGAT CCGGAGATCG ACGAGCGGAA CGCGCGAACG
TTACTGGCCT CCCGTAAGGA CCATCTCGAA CACGCCGTGC TCACCGAGGC CGTCGTGCAG
ACACTGCGGC CGTACTGCAC CCGACTGCAC GTCCCGCCCC GCCCGGAACT GGTGGCCACA
CCCACCGTGT GGCACCTGGG CACCACGATC ACGGGAGAAC TCGCCGATCC GGACGCCACG
GCGTTGCACC TCGCCGCCGC CCTGCATCCG ACCCCCGCCA TCTGCGGGAC GCCGACCTCC
TCGGCGCGGC GGCTGGCCAC CGAACTCGAG GGGTTCGACC GCGGTTACTA CGCGGGCGCG
GTCGGCTGGG TGGATGCGAA GGGCGACGGC GAGTGGGCCG TGTCGATCCG TTGTGCCGAG
GTGGCAAAGC AGTCGCTCCG GCTCTACGCG GGCGGCGGAA TCATGCCGGA ATCCGACCCG
AAAACGGAAC TGGAAGAAAC CTCGGCCAAA TTCGCGACGC TGCTGCGTGC GATGGGCCTA
CCCCAGGAAT GA
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| Protein sequence | MTGPSPLRLL SDYRRGDFFL ATAERTLLGT GALATVCDAD ESVLAERVRD TLDDVSTDGP
PLAVGVLPFH STAATPGRLV VPTRTRFGRA VHPEAAALPR RTIDAPVAVR PVPDPVDHMD
AVTAAVTALA ERGLRKVVLA RALDIEFDAP VRPEAILHNL VKDHDRGYTF AAELPAGKTL
VGSSPELLLS RRGRHVVSYP HAGSMPRSTD PEIDERNART LLASRKDHLE HAVLTEAVVQ
TLRPYCTRLH VPPRPELVAT PTVWHLGTTI TGELADPDAT ALHLAAALHP TPAICGTPTS
SARRLATELE GFDRGYYAGA VGWVDAKGDG EWAVSIRCAE VAKQSLRLYA GGGIMPESDP
KTELEETSAK FATLLRAMGL PQE
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