Gene Svir_33220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33220 
Symbol 
ID8388646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3606282 
End bp3606989 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID644977344 
Productphosphopantetheinyl transferase 
Protein accessionYP_003135113 
Protein GI257057281 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.492064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT GCTCCGTGTG GTGGTCGAAA CCGATCATCG AATCGGAGAA CACGTTGGCG 
CTGCTCGACC CCACCGAACG AACTCGCTAC GACTCCTACC GCAGGGTCGA GGACCGGCGC
CGGTTCCTCA CCGGGCGCGT ACTCGCCAAA ACCGTCGCGG CCGAACACCT GGGGGTGTCC
CCCGCTGAGA TCCACTTCGA CGCGACCTGC ACCGGCTGCG GCAAGCAGCA CGGCCCCGTG
CGCGTGCCGG ACGCCGAACT GGAGCTCTCC ATCTCCCACT CCGGTGAGCG CGTGGGGGTG
GCCGCCACCT CCGGCGCGGC GGTGGGACTC GACGTGGAGG CGATCGGCCG CAACATCGAG
GACTCGCTCA TCGCCTACGC GCTGAACGAC ACCGAACTCG CCACCCTGCC CGAGGAAGAG
GACGCACGGG CCGAGGACTT CTTCACGTAC TGGACCCGCA AGGAAGCGGT GATGAAGGCC
ACCGGGCGTG GCCTGCGCAT CCCCCTGCGC TCACTGACCC TGGCGAAGGC CACCGAGCCC
GCCCGCCTGC TCGCCTCGGA CGATCCCGCG TTGTCCCCCG AGTCGACCCG CATGGCCGAC
CTCGATCCCG GCTCCGGCTA CCGGGCCGCC GTGGCCGTCA TCACCACCGA CGAGATCGAC
GTCACCGAGC GTTGGTGGAC CCCACCGTCC CCGGGACACG GACAATAG
 
Protein sequence
MTECSVWWSK PIIESENTLA LLDPTERTRY DSYRRVEDRR RFLTGRVLAK TVAAEHLGVS 
PAEIHFDATC TGCGKQHGPV RVPDAELELS ISHSGERVGV AATSGAAVGL DVEAIGRNIE
DSLIAYALND TELATLPEEE DARAEDFFTY WTRKEAVMKA TGRGLRIPLR SLTLAKATEP
ARLLASDDPA LSPESTRMAD LDPGSGYRAA VAVITTDEID VTERWWTPPS PGHGQ