Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33220 |
Symbol | |
ID | 8388646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3606282 |
End bp | 3606989 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977344 |
Product | phosphopantetheinyl transferase |
Protein accession | YP_003135113 |
Protein GI | 257057281 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2091] Phosphopantetheinyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.492064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGT GCTCCGTGTG GTGGTCGAAA CCGATCATCG AATCGGAGAA CACGTTGGCG CTGCTCGACC CCACCGAACG AACTCGCTAC GACTCCTACC GCAGGGTCGA GGACCGGCGC CGGTTCCTCA CCGGGCGCGT ACTCGCCAAA ACCGTCGCGG CCGAACACCT GGGGGTGTCC CCCGCTGAGA TCCACTTCGA CGCGACCTGC ACCGGCTGCG GCAAGCAGCA CGGCCCCGTG CGCGTGCCGG ACGCCGAACT GGAGCTCTCC ATCTCCCACT CCGGTGAGCG CGTGGGGGTG GCCGCCACCT CCGGCGCGGC GGTGGGACTC GACGTGGAGG CGATCGGCCG CAACATCGAG GACTCGCTCA TCGCCTACGC GCTGAACGAC ACCGAACTCG CCACCCTGCC CGAGGAAGAG GACGCACGGG CCGAGGACTT CTTCACGTAC TGGACCCGCA AGGAAGCGGT GATGAAGGCC ACCGGGCGTG GCCTGCGCAT CCCCCTGCGC TCACTGACCC TGGCGAAGGC CACCGAGCCC GCCCGCCTGC TCGCCTCGGA CGATCCCGCG TTGTCCCCCG AGTCGACCCG CATGGCCGAC CTCGATCCCG GCTCCGGCTA CCGGGCCGCC GTGGCCGTCA TCACCACCGA CGAGATCGAC GTCACCGAGC GTTGGTGGAC CCCACCGTCC CCGGGACACG GACAATAG
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Protein sequence | MTECSVWWSK PIIESENTLA LLDPTERTRY DSYRRVEDRR RFLTGRVLAK TVAAEHLGVS PAEIHFDATC TGCGKQHGPV RVPDAELELS ISHSGERVGV AATSGAAVGL DVEAIGRNIE DSLIAYALND TELATLPEEE DARAEDFFTY WTRKEAVMKA TGRGLRIPLR SLTLAKATEP ARLLASDDPA LSPESTRMAD LDPGSGYRAA VAVITTDEID VTERWWTPPS PGHGQ
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