Gene Svir_33160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33160 
Symbol 
ID8388640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3601208 
End bp3601639 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID644977338 
Productacetyltransferase (GNAT) family protein 
Protein accessionYP_003135107 
Protein GI257057275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0204184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.66835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTAC GCGATGCTGT GGAAAGCGAT ATCGACGAGA TCTGCGCGAT GATCGAGGAG 
CACGCCCGGT ACGAGGGCAA CGACGATTTG GTCCTCGACC GTGCGGAGAT GCGGCGATAC
CTGTTCGGCC CCGATCCGAA GGCGTGGGTG CTGATCGCCG AGGTCGACGG TGAGACCGCG
GGGATGGCGT TTTGCACGTG GAGCTTCTCG ACGTGGGAGG CCAAGCCCGG CATCTGGCTC
GACGATCTGT TCATCCGCCC CGCCTATCGG CGGAGTGGAC TCGGCAGGCA ACTGCTGTAC
GAACTGCGGG CCCGCACGGA CGGCCGCGTG GAGTGGGAGA TGCAGGAGGG CAACGAGAAG
GCGGCCGCTT TCTACGCCGA GCTGGGCGCG GAGCCCGTGC CGGGCTGGGT GCGCTATCGC
TGGAAGCGCT GA
 
Protein sequence
MPVRDAVESD IDEICAMIEE HARYEGNDDL VLDRAEMRRY LFGPDPKAWV LIAEVDGETA 
GMAFCTWSFS TWEAKPGIWL DDLFIRPAYR RSGLGRQLLY ELRARTDGRV EWEMQEGNEK
AAAFYAELGA EPVPGWVRYR WKR