| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33110 |
|---|
| Symbol | |
|---|
| ID | 8388635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3595118 |
|---|
| End bp | 3596458 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977333 |
|---|
| Product | Mg2+ transporter MgtE |
|---|
| Protein accession | YP_003135102 |
|---|
| Protein GI | 257057270 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.237395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.754036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAC AGCCGGCACG GACTCTGCGG GATCTGCTCG ACGACAACGA CATCGCAGGA
CTGCAGGAGT GGCTCGCCGA GCACCAGCCG TACGAGATCG CCGACGAACT GGCCCGCGCC
GACGCGGTAC GGGCGGTGCT GCTCTTCCGG CTTCTCGACA AGGACCGGGC GCTCACCGTG
TTCGAGGAGC TCGACCCCAC CGACCAGCAC AAGGTGCTCT CCGGGCTGCG GGACCACGCA
TTCCGGGACG TGGTCGAGCG GATGAACACC GATGACCGTG CCCGCCTGTT GGGGGAGGCG
CCCGCCAAAT TCGCCCGCCG GGTGCTCGCC GGACTCAGTC CGAACGAACG GGCCCTGACA
GCGGCACTGC TCGGGTATCC CGAGCACGCC GTCGGCCGCT ACATGACCCC GGAGACGGTC
GCGGTGCGTT ACTACATCAC CGCCGAGGAG GCGCTCGCGG TGGTGCGGGC CAAAGGTCGG
CGGGCCGAGA CCGTCTACAC ACTGCCGGTG GTCGACGACC GGCGGGGTTT CGTCGGCACG
GTGTCATTGG GGGACCTCGT GCTCAGCCCG CCCGACCGGC AGGTACTGGA CATCGCCGAC
ACGAAGACCC CCAAGGTGCA GGCCACCGAC GACGTCGAGG AGGCCGCACG GTTGATGCAG
GACACCAACG TGCTGGCACT GCCGGTGACC GACAGTGAGA ACCGGGTGCT GGGCCTGCTC
ACCATCGACG ACGCGTTCGA GGTCATCGAG GCGGCCGACA CCGAGGACAT CGCGCGTCAG
TCCGCGGCGA CCCCGTGGAC CGGGCACTAC ATGTCGGCGA GCGTGGTGCA ACTGGCCAGG
TCGCGGGCGC TGTGGTTGTT GCTGCTGATC CTGGCGGCCA CGTTGACGGT GAACGTGCTC
CAGTTCTTCG AGGACACCCT GGCTAGCGTC ACGGCGCTGG CGCTGTTCAT CCCACTGCTC
GTCGGCACGG GCGGCAACGC GGGCGCGCAG GCGGCCACGG CCGCGGTACG GGCGATCGCC
GTGGGCGAGG TGCGCAGCCG CGACGTGTTG AAGGTGGCGT GGCGGGAGTG CCGGGTCGGG
TTCGTCCTCG GCGCCATGCT CGCGACGGTG GCCTTACTGG TGGGAACGCT GATCGTGGAC
TTCACCGTGG CGGCGAGTGT GGCGGTCTCC CTCGTCGTCG TCTGCGCGTG GGCGGCGACC
ATCGGGTCGG TGATGCCGTT GCTCGCCAAG CGGGTCGGCA TCGACCCGGC CGTGATCTCC
GCGCCGTTGG TGACCACGTT GGTCGACGCC ACCGGGCTGA TCATCTACTT CCTCGTGGCC
CAGTTCGTGT TCGGCCTATG A
|
|---|
| Protein sequence | MTAQPARTLR DLLDDNDIAG LQEWLAEHQP YEIADELARA DAVRAVLLFR LLDKDRALTV
FEELDPTDQH KVLSGLRDHA FRDVVERMNT DDRARLLGEA PAKFARRVLA GLSPNERALT
AALLGYPEHA VGRYMTPETV AVRYYITAEE ALAVVRAKGR RAETVYTLPV VDDRRGFVGT
VSLGDLVLSP PDRQVLDIAD TKTPKVQATD DVEEAARLMQ DTNVLALPVT DSENRVLGLL
TIDDAFEVIE AADTEDIARQ SAATPWTGHY MSASVVQLAR SRALWLLLLI LAATLTVNVL
QFFEDTLASV TALALFIPLL VGTGGNAGAQ AATAAVRAIA VGEVRSRDVL KVAWRECRVG
FVLGAMLATV ALLVGTLIVD FTVAASVAVS LVVVCAWAAT IGSVMPLLAK RVGIDPAVIS
APLVTTLVDA TGLIIYFLVA QFVFGL
|
|---|
| |