Gene Svir_33090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33090 
Symbol 
ID8388633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3592765 
End bp3593601 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID644977331 
ProductProtein of unknown function (DUF574) 
Protein accessionYP_003135100 
Protein GI257057268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACA CAGCGCACGA GATCCCGCCC TCGGCGAAGC TCGACCCCAC CAAGCCGACG 
GTCGCGCGTA TCTACGACGC CAGCCTCGGC GGCAAGGATC ATTACGAAGT CGACCGGCAG
GTCTTCGAGA TGATCAAGCA GGTGGCGCCG TACCAGGGTG ACGTCAGCAA GATGAACCGC
CGCTTCCTCG TGCGGGTCGT GCGCTACCTC ACCGAGATCG CGGGCATGGA CCAGTACCTC
GACCTCGGTA GCGGACTGCC CACCGTGCAG AACACCCACG AGGTCGCCCA GTTCAGCAAC
CCCGAGGCCC GCGTCGTCTA CGTGGACATC GACCCGATCT GCAACGTCCA CGGTCGGGCG
CTGCTGGAGG AGAACGAGTT CACCCGCTTC GTGGAGGGCG ACCTCACCAA GCCGGAGACC
ATCCTGGGCC ACCCGGAGAT CACCGGCCAC CTCGATCTCG ACCGGCCGTT GGTGCTGATG
CAGATCGGCA CCCTGCACCA CGTGTCCGAC GAGGAGGACC CCGTCGGGAT CATGCGCGCT
TACATCGACG CGTTGCCGTC GGGGTCGTAC GTGGCCATCA CGCACTTCTG GGACCCGGAC
ACCGAGAACC CCGAGCTGTC CCGCAAGGCC AAGGAGTTGG AGGCCAAGGT GCGGGAAGCG
GGCATGGGAT CCGGATTCTG GCGCAAGCGC GCGCAGATCG AGGAGATGTT CGGCGGCCTG
GAACTGCTGG AGCCGGGGCT GGTGGAACTC GACGACTGGT GGCCCGCCGG GCCGCGCACG
CGCGACCCCT GGCCCGAGGA ACACCTCATG CTCGGCGGCG TGGCGGTCAA GCGCTGA
 
Protein sequence
MSDTAHEIPP SAKLDPTKPT VARIYDASLG GKDHYEVDRQ VFEMIKQVAP YQGDVSKMNR 
RFLVRVVRYL TEIAGMDQYL DLGSGLPTVQ NTHEVAQFSN PEARVVYVDI DPICNVHGRA
LLEENEFTRF VEGDLTKPET ILGHPEITGH LDLDRPLVLM QIGTLHHVSD EEDPVGIMRA
YIDALPSGSY VAITHFWDPD TENPELSRKA KELEAKVREA GMGSGFWRKR AQIEEMFGGL
ELLEPGLVEL DDWWPAGPRT RDPWPEEHLM LGGVAVKR