Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32990 |
Symbol | |
ID | 8388623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3578509 |
End bp | 3579978 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977323 |
Product | pentulose/hexulose kinase |
Protein accession | YP_003135092 |
Protein GI | 257057260 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.257743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCAAC GCGCCTACCT CGGAGTCGAC ATCGGCACCT CCAGCAGCAA AGGGGTACTC GTCCGCCCCG GTGGGCGCAT CCTGCGCACG GCCGTCCGCG GACATTCCGT CGACCGTCCC GCCGCCGGGC GCGTCGAGAT GGACGCACGA CTCTGGTGGA CCGAGTTCGT CGAGCTGGCG AGCGAACTCA CCGCGCCCGG CGACGTCGAG GTCGCGGCCG TGGGCGTCAG CGGCATGGGC CCGTGTGTGG CGGTGACCGA CGAGGACGGC GTGCCGCTGC GGCCCGCGAT CCTGTACGGC GTCGACACGC GGGCGAGCGC GCAGATCGAG GCGTTGAACG CCGAGCTCGG CGCGACGGAG ATCTTCGACC GGTGTGGTGC GGAGCTGACG AGTCAGGCCG TGGGGCCGAA GCTGCGCTGG ATCGCCGACA CCGAACCCGA CGTCTTCGCC CGCGCCCGGC GCCTGTTCCA GCCGAGTTCG TGGCTGGTGT ACCAACTGAC GGGCGAGTAC GTGCTCGACT ACCACTCCGC CAGCCAACAC ACGCCGCTGT TCGACACGGT GGAGGTCGAC TGGCACGAGG ACTGGGTGCG CCACATCTGT CCGGACCTCG AACTGCCGCG GTTGCGGTGG CCCGGTGAGG CGGCCGGGGT CACCACGCGC GAGGTCGGTG GCGTCCCGGC GGGCGTGCCG GTGATCACGG GGACGATCGA CGCGTGGTCG GAGGCCGTGA GTGTCGACGC GCAGAACCCC GGCGACCTCA TGATCATGTA CGGCACCACG ATGTTCCTCA TCAACACCAC GCGGGAACGT CTTGCCACGC CGGCCATGTG GAGCACGCTG GGCGCCGTCC CGGGCACCCG CAACCTGGCG GGCGGTATGG CGACGTCGGG TGCGATCACG GCCTGGCTGC GCGAGCTCAC CGGCGGCACC GACTACCCCA CCATGCTCGC CGAGGCCCGC GACTCGGGTC CGGGTGCGAA CGGGCTGCTC GTGCTGCCGT ACTTCGCGGG CGAACGCACC CCGATCTTCG ACCCGGACGC CCGGGGGGTC GTGGCGGGTC TGACGCTGAG CCACACCCGC GGCGACCTGT ACCGCGCGGT GCTGGAGGCC ACCGCCTTCG CCGTACGACA CAACATCGAA GCACTGCGCG AGGCGGGTTC GGATATCTTC CGGGTGGTCG CCGTCGGCGG CGGCACACAG GGCGAGCTGT GGACCCAGAT CGTCTCCGAT GTCACCGGCC TGGCCCAGAC GGTGCCGAAC GTGACCATCG GCGCCAGCTA CGGCGCCGCG TTCCTCGCCG CCCGACTCGA CGGCGAAGAG CACATCTCCG ACTGGAATCC ACCCGCCCAC GTCCGTGAAC CGAACCCGGA ACTGCGCGAG GCGTACGACA TCCTCTACGA GCAGTACCGG GCCCTGTACC CGGCGACCCG TGACGTGGTG CACGTCCTGG CCGAGCGGCA ACGAAACTGA
|
Protein sequence | MRQRAYLGVD IGTSSSKGVL VRPGGRILRT AVRGHSVDRP AAGRVEMDAR LWWTEFVELA SELTAPGDVE VAAVGVSGMG PCVAVTDEDG VPLRPAILYG VDTRASAQIE ALNAELGATE IFDRCGAELT SQAVGPKLRW IADTEPDVFA RARRLFQPSS WLVYQLTGEY VLDYHSASQH TPLFDTVEVD WHEDWVRHIC PDLELPRLRW PGEAAGVTTR EVGGVPAGVP VITGTIDAWS EAVSVDAQNP GDLMIMYGTT MFLINTTRER LATPAMWSTL GAVPGTRNLA GGMATSGAIT AWLRELTGGT DYPTMLAEAR DSGPGANGLL VLPYFAGERT PIFDPDARGV VAGLTLSHTR GDLYRAVLEA TAFAVRHNIE ALREAGSDIF RVVAVGGGTQ GELWTQIVSD VTGLAQTVPN VTIGASYGAA FLAARLDGEE HISDWNPPAH VREPNPELRE AYDILYEQYR ALYPATRDVV HVLAERQRN
|
| |