Gene Svir_32890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32890 
Symbol 
ID8388613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3570053 
End bp3570829 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID644977314 
Productenoyl-CoA hydratase 
Protein accessionYP_003135083 
Protein GI257057251 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0620133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAC AGTACGAGTC GATCCGCGTG GAGACCCGTG ACCGCGTGAC GACCGTCGTC 
CTCGACCGCC CGGAGCGGCG TAACGCCGTG GACGGGCCGA TGGCCGCGGA ACTCGCGCAC
GCGTTCAAGG CCTTCGACCA CGACCCGGAC GCCGACGTCG CGGTGCTCTG GGGCAACGGC
GGGCATTTCT GCGCGGGCGC CGACCTGAAG GCCGTGGGCA CCCCGCGCCA GAACACGGTC
GCGGTGTCCG GGGACGGCCC GATGGGACCG ACGCGACTGC GGCTGAGCAA ACCGGTGATC
GCCGCGGTGG AGGGATACGC GGTGGCCGGT GGGTTGGAAC TGGCGATCTG GTGCGACCTC
AGGGTGGTGG CCTCGGACGC GATATTCGGC GTCTTCTGCC GACGTTGGGG CGTGCCGCTC
ATCGACGGCG GCACCGTTCG TCTGCCCCGA CTCATCGGCA CCAGCCGGGC CATGGACATG
ATCCTCACCG GCCGTCCCGT CGACGCTCGG GAAGCCGCCG AGTTCGGACT GGCCAACCGG
GTCGTCGTTC CCGGAACCGC GCGCGAGGAA GCCGAAACCC TCGCCCGCCG GCTCACCGCT
TTCCCGCAGA CGTGCCTACG CAACGACAGA AGGTCGGCGT ATGAACAGGA AGGGCTCACC
GAGGAAGAGG CCCTCCGTTT CGAGATCGGT GTCGGACTGG AATCGCTGCG CGCAGACGGG
ACCTCCGGGG CCGCCCGCTT CACCGCCGGT TCCGGCCGAC ACGGCTCCTT CACCTGA
 
Protein sequence
MTEQYESIRV ETRDRVTTVV LDRPERRNAV DGPMAAELAH AFKAFDHDPD ADVAVLWGNG 
GHFCAGADLK AVGTPRQNTV AVSGDGPMGP TRLRLSKPVI AAVEGYAVAG GLELAIWCDL
RVVASDAIFG VFCRRWGVPL IDGGTVRLPR LIGTSRAMDM ILTGRPVDAR EAAEFGLANR
VVVPGTAREE AETLARRLTA FPQTCLRNDR RSAYEQEGLT EEEALRFEIG VGLESLRADG
TSGAARFTAG SGRHGSFT