Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32760 |
Symbol | |
ID | 8388600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3556288 |
End bp | 3557637 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977303 |
Product | signal transduction histidine kinase |
Protein accession | YP_003135073 |
Protein GI | 257057241 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCTGT TGGCGGCCTT CTGCGTCGCC TGCGCGGTCG CGCTCGTCTC GTTCGGCGCG TACATCACCG TGCACCGCAA TCTGTACGCG GCGTTAGACG AGAACCTCAT CAACCGTGCG GAAGCGGCCG TCCAAAGCCC GGCGGTGCAG ACCCGCCTGC AGTCCATCCC CGGCGCGTTC CTGGTCAGCA GTGACATCCA CATCGGGCTC CTCACCGCCA ACGGCGAGAT GATCTTTCCC CGCGCGGGCA CGCCACCGCC CTGGGGGAAA CGGGAACTCG CCGTCGCCAC GGGAATCGAC GAATCGTCGC TGCGCACGGA CTCGGCCACC GACATGCGTG TCATCGCCCT TCCCGCGGGC CACGGTGTCG CCATGGTGCT CGCACAGTCG TTGCAGCCCA CGAAACAAAC GTTGAACGAA CTCGCGTTGG TGCTGTTCTT CTTCGGTGGG GCGGGCATCC TGGTCGCGGC GGCCGCGGGT ACCGCCGTGG CACGCGCCGG ACTGCGGCCT GTGGAGAAAC TGACATGGGC CACCGAGCGG GTCACCCGCA CCATGGACCT GCGGCCGATC CCCGTCAGCG GTGACGACGA GCTCGCGCGA TTGACGCAGA GCTTCAACAC CATGCTGCGC GCGGTCGCGG AATCGCAGGA CCGCCAACGC CGGCTCGTCG CTGATGCCGG ACATGAACTG CGCACCCCGT TGACGTCGCT ACGCACCAAC CTGGAGCTGC TCCTGGCCGC CAGTAAGGAA GGCGCCCCGA CGCTGTCCGA ACGTGACCGC GCGGACATCG AGGCCGACAT CCGTGCGCAA CTGGACGAGG TGACACAGCT CATCGACGAT TTGTCCGAGC TGTCCCGGGA GGACACGGCG CGGGACACCG CTGAACGCGT GGACCTCGTC GACGTGGTCG AACGCGCTCT CGAGCGGGCC CGACGGCGAG CGGGCAGCAT CGAGTTCGAC ACCGAACTCC ACCCGTGGGT GCTGGTCGGT GATCCCCACA GTCTCGAACG TGCCGTGCTG AACCTGTTGG ACAACGCCGT CAAGTTCTCC CCGCAGGATT CGGTCGTGCG GGTCGTGCTG CGTCCACTCG GCGACGGCAC CGCGGTGATC GAGGTGTCCG ACTCGGGCCC CGGGATCGCC CCCGAGGACC TGCCCATGGT GTTCGACCGC TTCTACCGTT CGTCCGAGGC GCGCACCCTC CCCGGTTCGG GACTCGGCCT GGCCATCGTC AAACAGGCCG CGGAACGGCA CGGCGGAACC GTGTACGCGA ACAACAAACC CGAGGGCGGC GCGCTCATGG CGATCCGACT GCCCGGCATC CCGGGGATGA CGGACGATGA CACCGCTTGA
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Protein sequence | MSLLAAFCVA CAVALVSFGA YITVHRNLYA ALDENLINRA EAAVQSPAVQ TRLQSIPGAF LVSSDIHIGL LTANGEMIFP RAGTPPPWGK RELAVATGID ESSLRTDSAT DMRVIALPAG HGVAMVLAQS LQPTKQTLNE LALVLFFFGG AGILVAAAAG TAVARAGLRP VEKLTWATER VTRTMDLRPI PVSGDDELAR LTQSFNTMLR AVAESQDRQR RLVADAGHEL RTPLTSLRTN LELLLAASKE GAPTLSERDR ADIEADIRAQ LDEVTQLIDD LSELSREDTA RDTAERVDLV DVVERALERA RRRAGSIEFD TELHPWVLVG DPHSLERAVL NLLDNAVKFS PQDSVVRVVL RPLGDGTAVI EVSDSGPGIA PEDLPMVFDR FYRSSEARTL PGSGLGLAIV KQAAERHGGT VYANNKPEGG ALMAIRLPGI PGMTDDDTA
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