Gene Svir_32760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32760 
Symbol 
ID8388600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3556288 
End bp3557637 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content68% 
IMG OID644977303 
Productsignal transduction histidine kinase 
Protein accessionYP_003135073 
Protein GI257057241 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTGT TGGCGGCCTT CTGCGTCGCC TGCGCGGTCG CGCTCGTCTC GTTCGGCGCG 
TACATCACCG TGCACCGCAA TCTGTACGCG GCGTTAGACG AGAACCTCAT CAACCGTGCG
GAAGCGGCCG TCCAAAGCCC GGCGGTGCAG ACCCGCCTGC AGTCCATCCC CGGCGCGTTC
CTGGTCAGCA GTGACATCCA CATCGGGCTC CTCACCGCCA ACGGCGAGAT GATCTTTCCC
CGCGCGGGCA CGCCACCGCC CTGGGGGAAA CGGGAACTCG CCGTCGCCAC GGGAATCGAC
GAATCGTCGC TGCGCACGGA CTCGGCCACC GACATGCGTG TCATCGCCCT TCCCGCGGGC
CACGGTGTCG CCATGGTGCT CGCACAGTCG TTGCAGCCCA CGAAACAAAC GTTGAACGAA
CTCGCGTTGG TGCTGTTCTT CTTCGGTGGG GCGGGCATCC TGGTCGCGGC GGCCGCGGGT
ACCGCCGTGG CACGCGCCGG ACTGCGGCCT GTGGAGAAAC TGACATGGGC CACCGAGCGG
GTCACCCGCA CCATGGACCT GCGGCCGATC CCCGTCAGCG GTGACGACGA GCTCGCGCGA
TTGACGCAGA GCTTCAACAC CATGCTGCGC GCGGTCGCGG AATCGCAGGA CCGCCAACGC
CGGCTCGTCG CTGATGCCGG ACATGAACTG CGCACCCCGT TGACGTCGCT ACGCACCAAC
CTGGAGCTGC TCCTGGCCGC CAGTAAGGAA GGCGCCCCGA CGCTGTCCGA ACGTGACCGC
GCGGACATCG AGGCCGACAT CCGTGCGCAA CTGGACGAGG TGACACAGCT CATCGACGAT
TTGTCCGAGC TGTCCCGGGA GGACACGGCG CGGGACACCG CTGAACGCGT GGACCTCGTC
GACGTGGTCG AACGCGCTCT CGAGCGGGCC CGACGGCGAG CGGGCAGCAT CGAGTTCGAC
ACCGAACTCC ACCCGTGGGT GCTGGTCGGT GATCCCCACA GTCTCGAACG TGCCGTGCTG
AACCTGTTGG ACAACGCCGT CAAGTTCTCC CCGCAGGATT CGGTCGTGCG GGTCGTGCTG
CGTCCACTCG GCGACGGCAC CGCGGTGATC GAGGTGTCCG ACTCGGGCCC CGGGATCGCC
CCCGAGGACC TGCCCATGGT GTTCGACCGC TTCTACCGTT CGTCCGAGGC GCGCACCCTC
CCCGGTTCGG GACTCGGCCT GGCCATCGTC AAACAGGCCG CGGAACGGCA CGGCGGAACC
GTGTACGCGA ACAACAAACC CGAGGGCGGC GCGCTCATGG CGATCCGACT GCCCGGCATC
CCGGGGATGA CGGACGATGA CACCGCTTGA
 
Protein sequence
MSLLAAFCVA CAVALVSFGA YITVHRNLYA ALDENLINRA EAAVQSPAVQ TRLQSIPGAF 
LVSSDIHIGL LTANGEMIFP RAGTPPPWGK RELAVATGID ESSLRTDSAT DMRVIALPAG
HGVAMVLAQS LQPTKQTLNE LALVLFFFGG AGILVAAAAG TAVARAGLRP VEKLTWATER
VTRTMDLRPI PVSGDDELAR LTQSFNTMLR AVAESQDRQR RLVADAGHEL RTPLTSLRTN
LELLLAASKE GAPTLSERDR ADIEADIRAQ LDEVTQLIDD LSELSREDTA RDTAERVDLV
DVVERALERA RRRAGSIEFD TELHPWVLVG DPHSLERAVL NLLDNAVKFS PQDSVVRVVL
RPLGDGTAVI EVSDSGPGIA PEDLPMVFDR FYRSSEARTL PGSGLGLAIV KQAAERHGGT
VYANNKPEGG ALMAIRLPGI PGMTDDDTA