Gene Svir_32690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32690 
Symbol 
ID8388593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3550871 
End bp3551209 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID644977296 
Productputative regulatory protein, FmdB family 
Protein accessionYP_003135066 
Protein GI257057234 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.914233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCT ATCAGTACGC CTGCAAGGAG TGCGACCACC AGTTCGAGGT GGTCCAGTCG 
TTCTCCGACG CGAGTCTGAC GGACTGCCCC GAGTGCCAGG GGCCGCTGCG CAAGCTCTAC
GGCTCGGTCG GCGTCATCTT CAAGGGCAGC GGCTTCTACC GCACCGACTC CCGGTCGGAC
TCGGGATCGG GCTCCTCGTC GGCCAAGTCG TCCAACGGCT CCAGCAGCGG CTCATCCAGC
GACTCCGCCA AGTCGGACTC GGGTTCCGCC AAGTCGGACT CGAGCTCCAA CTCGTCCTCC
TCGTCCAGCT CCAGCACCAC ATCCGCCGCG GCGTCCTGA
 
Protein sequence
MPTYQYACKE CDHQFEVVQS FSDASLTDCP ECQGPLRKLY GSVGVIFKGS GFYRTDSRSD 
SGSGSSSAKS SNGSSSGSSS DSAKSDSGSA KSDSSSNSSS SSSSSTTSAA AS