| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32550 |
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| Symbol | |
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| ID | 8388579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3533640 |
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| End bp | 3535574 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977282 |
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| Product | acyl-CoA synthetase/AMP-acid ligase |
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| Protein accession | YP_003135053 |
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| Protein GI | 257057221 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.113888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA TGCCTGACGT GGCCGAGACA ACCGACAAGG TCGGCACGGG AAGCACGGGT
GCGTACGCCG AGCAGTACCG ACGCAGTCTC GACGACCCCG ACGGTTTCTG GCTGGAGGCC
GCACGGGCGG TCGACTGGAC ACGGCGCCCC ACCCGGGCGC TCGACGACTC GGCCGCACCG
CTGTACCGAT GGTTTCCCGA CGGGGAGCTC AACACGGCGC ACAATGCGCT GGACCGCCAC
GTCGACGCGG GCCGGGGCGA ACAGGACGCA CTGCTGTGGG ACTCCCCCGT CACCGGTTCG
AAACGCCGCT ACACCTACCG CGAGCTGCGC GACGAGGTGG CCACGTTCGC GGGCGCGCTG
CGCGGGCTGG GGGTCGGGAA GGGGGACCGG GTCGTCCTCT ACCTGCCCAT GGTGCCGGAG
GCGGTCATCG CCATGCTCGC CTGTGCCCGG TTGGGCGCGG TGCACTCCGT GGTGTTCGGC
GGGTTCGCGC CGAGGGAACT GGCCACCCGC GTCGACGACG CCCGGCCGAA GGTCGTGGTC
ACGGCGTCGT GCGGCATCGA GCCGACACGC GTGGTGGAGT ACGTGCCGAT CGTGCGGAGG
GCACTGGCGG ACACCACCCA CCGGCCCGAT CACGTCGTGG TGCTCCAGCG GGACACGAAA
CACGCCGAAC TCCGGGACGG GGAGCTCGAC TGGACGACGC TTGTGGCCTC CGCGCGTCCC
GTCGATCCCG TACCGGTGGC CGCGACCGAT CCGCTCTACA TCCTCTACAC GTCCGGCACC
ACCGGTAGGC CGAAGGGCGT GGTGCGGGAC ACCGGTGGGC ACGCGGTGGC GTTGACGTGG
TCGATGGCCA ACATCTACGA CATCGGTCCC GGCGACGTCT GGTGGACGGC GTCCGACGTC
GGCTGGGTGG TCGGCCACTC CTACATCGTG TACGCGCCAC TACTGGTGGG GGCCACGTCG
GTGCTCTACG AGGGTAAACC GGTGGGCACA CCCGATGCGG GCGCGTTCTG GCGCGTGGTG
TCCGAGTACG GAGTGCGGGC ACTGTTCACC GCGCCCACGG CGATCAGGGC CATCAAACGT
GTCGACCCCG ACGGCGCCGA GATGGCGCGT TACGACCTCA GCCGGTTCCG CACCCTGTTC
CTGGCGGGGG AACGGACGGA CCCGCAGACG TACCACTGGG CGGCCGAGCG GTTGGGTGTG
CCGGTGGTCG ACCACTGGTG GCAGACGGAG ACGGGCTGGG CGATCGCGGC GAATCCACGG
GGCCTCGAAC CGCTGCCGCC GAAACCCGGA TCGGTCACCG TCCCCATGCC GGGCTGGGAC
GTGCGGGTGC TGGACCAGTC CGGCAAGGAG CGGCCCTCAG GCCAGGAGGG CGCGATAGCG
GTGCGGCTGC CGTTGCCGCC GGGTGCGCTG CCGACGTTGT GGGGCGACGA CGACCGCTAC
ATCGAGGCGT ACCTGTCGCG TTACGAGGGC TATTACCTCA CCGGCGATTC GGGCTACCTC
GACCCCGACG GTTACCTCTT CGTCATGGGC CGCACCGACG ACGTCATCAA CGTCGCGGGC
CATCGGCTGT CCACCGGTGC GATCGAGGCG GTGCTGGCCG CGCATCCCGC CGTGGCCGAA
TGCGCGGTGA TCGGGGTGCA CGACGCGCTC AAGGGGCAGT TGCCACGGGG ATTCGTGGTG
CTCAAGGCGG GCGCGGACAT CACGGAGGAG AAGCTGCGCG AGGAGCTCGT GGCCGCGGTG
CGTGCCGAGA TCGGCCCCGT GGCGGCCTTC CGCGACGTCG CCGTGGTGGA CGCGCTCCCG
AAGACCCGTT CGGGCAAGGT GCTGCGCAAG ACCATGCGGG CCCTCGCCGA CGGCCGTGAC
GAACCGGTGC CCTCCACGAT CGAGGACCCG GAGGTGCTGG ATCGGCTCAA GGCGGTGCTG
CGGCCAAAGC GGTAG
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| Protein sequence | MPDMPDVAET TDKVGTGSTG AYAEQYRRSL DDPDGFWLEA ARAVDWTRRP TRALDDSAAP
LYRWFPDGEL NTAHNALDRH VDAGRGEQDA LLWDSPVTGS KRRYTYRELR DEVATFAGAL
RGLGVGKGDR VVLYLPMVPE AVIAMLACAR LGAVHSVVFG GFAPRELATR VDDARPKVVV
TASCGIEPTR VVEYVPIVRR ALADTTHRPD HVVVLQRDTK HAELRDGELD WTTLVASARP
VDPVPVAATD PLYILYTSGT TGRPKGVVRD TGGHAVALTW SMANIYDIGP GDVWWTASDV
GWVVGHSYIV YAPLLVGATS VLYEGKPVGT PDAGAFWRVV SEYGVRALFT APTAIRAIKR
VDPDGAEMAR YDLSRFRTLF LAGERTDPQT YHWAAERLGV PVVDHWWQTE TGWAIAANPR
GLEPLPPKPG SVTVPMPGWD VRVLDQSGKE RPSGQEGAIA VRLPLPPGAL PTLWGDDDRY
IEAYLSRYEG YYLTGDSGYL DPDGYLFVMG RTDDVINVAG HRLSTGAIEA VLAAHPAVAE
CAVIGVHDAL KGQLPRGFVV LKAGADITEE KLREELVAAV RAEIGPVAAF RDVAVVDALP
KTRSGKVLRK TMRALADGRD EPVPSTIEDP EVLDRLKAVL RPKR
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