Gene Svir_32530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32530 
Symbol 
ID8388577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3529908 
End bp3531443 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content68% 
IMG OID644977280 
Productdolichyl-phosphate-mannose--protein O-mannosyl transferase 
Protein accessionYP_003135051 
Protein GI257057219 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCAGG CACCACGGCT TCGAAAGCCC CCGGTTGACC GCGAAGCCGC CTTATTGGGC 
AGACCGATGC CGGATGACCG GGTGCGAGCC CTGATCGTCA CGCTCGTGTT GACGGCCATC
GGCGCGCTCG TGCGGCTGCA GAACCTGGAC GTGCCCACCG ACAAGGGCAC ACCGGTGTTC
GACGAGAAAC ACTACGTACC CCAGGCGTGG CAGATGCTGC GCAACGGCGG GTACGAGGAC
AACCACGGCT ACGAACTGAT CGTGCACCCC CCGCTGGCGA AGCAACTCAT CGCCGTCGGG
GAGTGGATCT TCGGTTACAA CGCCTGGGGC TGGCGGTTCA GCGCGGCCGT CGCGGGCGCG
CTCATCGTGC TGCTCACCGT CCGCATCGCA CGGCGGCTGA CCCGGTCCAC GCTGTTGGGC
GCGGTGGCGG GTGTGCTCGT CATCTGCGAC GGTGTCCTGC ACCTGCAATC CCGGTCGGGG
ATGCTCGACA TCTTCCTCGC GCTGTTCGTC CTCGCCGCGT TCGGCTGTGT CCTGCTGGAC
CGCGACCAGG TGCGCGAACG ACTGGCCCTC GCCGTGCGCG AGGGCTGGAT CGAAGAATCG
CCCTACGGAC CACGACTCGG CTTCCGCTGG TGGCGTTTCG GCGCGGGCGT GTCGTTGGGT
CTGGCCACGG CGGTGAAGTG GTCGGGCGCG TACTGGGTGA TCGCCTTCGC GCTGCTGACC
CTGGCCTTCG ACGTCACCGC GCGGAGGACG GCCGGTGTGC GACGCCCCTG GCTGGGGGTG
CTGCGCCAGG ACGTGCCGCC GGTGGCGTGG AGCATCGGTG TCATCTCGGT ACTGACGTAC
CTGGGTGGTT GGTGGGCGTG GTTCGCCAGC GAAACCGCCA CCGACCGTCA TTACGTGGAG
ATCCAGGACA TCGGCGAGGG ACCGTTCGGG TTCGTGCCCG ACGCGCTGCG TTCCCTCGTG
CTGTACACGA CGAACGTCCT GGACTTCCAC AACAACCTCG CCACGCCCGA CGGTGATCCG
CACCCGTGGG AGTCGAAGCC GTGGACGTGG CCGATGGGAC TGCGCCCGAT GCTGTACCAC
TACGAGTCGG GCGAGCACGT CACGGGCTGC GGGGAATCGG AGTGCGTGAG CGCCACCATG
CTCATCGGGA CGCCGGCGAT GTGGTGGCTC GCGCTGCCGG TGCTGGCGTG GGGGCTGTGG
CGAGCGGTGT TCCGCACCGA TTGGCGCTAC GCCGCTGTGC TCGTGGGCTA TCTCGCGGGG
CTGCTGCCGT GGTTCGTCAA CCTCGACCGA CAGATGTACT ACTTCTACGC CACGCCGTTG
GCACCGTTTT TGGCCCTGGG GCTGACGCTC GTGCTGGGAC AGATCCTCGG CAGCGCCCGC
AACGGCTACG AACGACGCGG CACCGGCCTT CTGGTGCTGT CGCTGTACAT CGGATTGGTG
GTCGCGAACT TCGCGTGGCT GTGGCCCGTC CTGAACGGCG AACCGATCAC CCACGACCGT
TGGCAGGCCG AGCTGTGGTT GCCGTCGTGG CGGTGA
 
Protein sequence
MGQAPRLRKP PVDREAALLG RPMPDDRVRA LIVTLVLTAI GALVRLQNLD VPTDKGTPVF 
DEKHYVPQAW QMLRNGGYED NHGYELIVHP PLAKQLIAVG EWIFGYNAWG WRFSAAVAGA
LIVLLTVRIA RRLTRSTLLG AVAGVLVICD GVLHLQSRSG MLDIFLALFV LAAFGCVLLD
RDQVRERLAL AVREGWIEES PYGPRLGFRW WRFGAGVSLG LATAVKWSGA YWVIAFALLT
LAFDVTARRT AGVRRPWLGV LRQDVPPVAW SIGVISVLTY LGGWWAWFAS ETATDRHYVE
IQDIGEGPFG FVPDALRSLV LYTTNVLDFH NNLATPDGDP HPWESKPWTW PMGLRPMLYH
YESGEHVTGC GESECVSATM LIGTPAMWWL ALPVLAWGLW RAVFRTDWRY AAVLVGYLAG
LLPWFVNLDR QMYYFYATPL APFLALGLTL VLGQILGSAR NGYERRGTGL LVLSLYIGLV
VANFAWLWPV LNGEPITHDR WQAELWLPSW R