| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32490 |
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| Symbol | |
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| ID | 8388573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3524549 |
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| End bp | 3526336 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644977276 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_003135047 |
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| Protein GI | 257057215 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.84169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGACCG CGGTGGCCTG GCCTTACGCC AACGGCCCCC GCCACATCGG CCATGTATCC
GGTTTCGGCG TTCCGTCCGA CGTTTTCTCC CGCTACCAGC GAATGGCCGG TAACAAGGTG
CTCATGGTGT CGGGTACCGA CGAACACGGC ACCCCGATCC AGGTCCAGGC CGAGAAGGAG
GGCCTGACCC CGCAGCAGGC GGCCGACAAG TACACCCGCC AGATCACCGA GGACCTGCAG
GGGCTCGGGA TGTCGTACGA CCTGTTCACC AGGACCAGTA CCGGCAACCA CGCCAAGGTG
GTCCAGGAGA TCTTCCTGGC CCTGTACCGC AACGGTTACG TCGTCCCCAT GACCACCACG
GGCGCCATCA GCCCGTCCAC GGGACGCACG TTGCCCGACC GGTACATCGA GGGGACCTGC
CCCATCTGCG GTTACGACGG TGCTCGCGGG GACCAGTGCG ACAACTGCGG CAACCAACTC
GACGCCACCG AGCTGCGTAA TCCGCGTTCG CGCATCAACG GCGAGACGCC GAAGTTCGTC
GAGACCGAGC ATCTGTTCCT GGACCTGCCG GCGTTCACCG AGACGTTGGG TAGGTGGCTG
TCCACCAAAA CCGAGTGGCG GCCCAACGTC CTCAACTTCA CCCGCAACCT CGTGGAGGAC
ATGCGTCCCC GACCCATCAC ACGTGATCTC GACTGGGGGG TGAAGATCCC GCTCGACGGT
TGGCGCGACC AGCCGATGAA GCGGTTCTAC GTCTGGTTCG ACGCGGTGAT CGGGTATTTC
TCCGCCAGCG TGGAGTGGGC CCGCCGTTTA GGTGACCCGG ACGCCTGGCA GCAGTGGTGG
AACAACCCCG ACGCGCGGGG CTACTACTTC ATGGGCAAGG ACAACATCAC CTTCCACGCC
CAGATCTGGC CGGCGTTGTT GCTCGGCCAC AACGGTGAGG GCGACAAGGG GGGTGGACCG
GGGCCGTACG GAAAGCTGCG GCTGCCGGAC GAGATCGTCT CCAGCGAGTT CCTCACCATG
AGCGGCTCCA AGTTCTCCAC CTCGCGCGGC ACGGTGATCT ACGTGCACGA CTTCCTGCGC
GAGTTCGGCC CCGACACGTT GCGCTACTTC ATCAGCGTGG CCGGGCCCGA GACGCAGGAC
ACCGACTTCA CGTGGGACGA GTTCGTGCGT CGCATCAACT TCGAGCTCGC CAACGAGTGG
GGCAACCTCG TCAACCGGTC GATCTCGATG GCGCACAAGA ACAACGGCGG CATCCCTCGG
CCCGGGACGC CGACGCAGGC CGATGAGGAC CTCAAGGCGT TGGCCAAGGC GGCGTTCGAC
ACGGTGGGCG GGCATCTGAG CCGCTCCCGG TTCAAACTGG CCGCGCAGGA GGCCATGCGC
GTGGTCTCGG CGGCCAACAA GTACCTGTCC GATCAGCAGC CGTGGAAGCT CAAGGACGAT
CCCGAGCGCC GGGACACGGT GTTGCACACG GCGCTGCAGG TGGTGTCCGA CGCCAACACG
CTGCTCACCC CGTTCCTGCC GCACGCGGCG CAGAAGGTGC ACGAGGCGCT GGGCGGCACG
GGCGTGTGGG CCGCTCAACC GGAGCTTTTC GAGGTCGCCG ACCTCGACCT GCCCGACCGG
GTCAACCCGA TCATCACCGG GGACTACACG GTGGAGCAGG CCCGCTGGGA GTCCGTGCCG
ATCGAGGTGG GACGCCCACT GGAGAAGCCG ACGCCGTTGT TCGCCAAGCT CGATCCGAAG
CTCGCCGAGA CCGGACCCGA ATGGGCTCCG ATTAACGTCG AGGCATGA
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| Protein sequence | MLTAVAWPYA NGPRHIGHVS GFGVPSDVFS RYQRMAGNKV LMVSGTDEHG TPIQVQAEKE
GLTPQQAADK YTRQITEDLQ GLGMSYDLFT RTSTGNHAKV VQEIFLALYR NGYVVPMTTT
GAISPSTGRT LPDRYIEGTC PICGYDGARG DQCDNCGNQL DATELRNPRS RINGETPKFV
ETEHLFLDLP AFTETLGRWL STKTEWRPNV LNFTRNLVED MRPRPITRDL DWGVKIPLDG
WRDQPMKRFY VWFDAVIGYF SASVEWARRL GDPDAWQQWW NNPDARGYYF MGKDNITFHA
QIWPALLLGH NGEGDKGGGP GPYGKLRLPD EIVSSEFLTM SGSKFSTSRG TVIYVHDFLR
EFGPDTLRYF ISVAGPETQD TDFTWDEFVR RINFELANEW GNLVNRSISM AHKNNGGIPR
PGTPTQADED LKALAKAAFD TVGGHLSRSR FKLAAQEAMR VVSAANKYLS DQQPWKLKDD
PERRDTVLHT ALQVVSDANT LLTPFLPHAA QKVHEALGGT GVWAAQPELF EVADLDLPDR
VNPIITGDYT VEQARWESVP IEVGRPLEKP TPLFAKLDPK LAETGPEWAP INVEA
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