Gene Svir_32320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32320 
Symbol 
ID8388556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3506495 
End bp3507097 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID644977259 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003135031 
Protein GI257057199 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.247928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGG CGGAACGCAG ACAGCAGCTG CTCGACGTGG CACGGTCGCT GTTCGCCGAG 
AAGGGATTCG ACGGCACCTC GATCGAGGAG ATCGCCAATC GGGCGAACGT GTCCAAGCCC
GTGGTGTACG AACACTTCGG CGGCAAGGAA GGCATCTACG CCGTCGTGGT GGACCGGGAG
ACCCGGTTGT TGCTCGACCG GATGGTGTCC ACGCTGCACG GGGGGCACCC GCGTGAGTTG
CTGGAGCAGG CGGCTGTCGC GCTGTTGAGT TACGTCGAGG ACTGTCACGA CGGGTTCCGC
ATCCTCGTGC GTGACTCGCC GGTGGCGAGT TCGACGGGGA CGTTCTCCAC GCTGCTCAAC
GACATCGCCA GTCAAGTGGA GTACGTGCTG GCTCAGGAGT TCGACTCACG GGGCTACGAC
GACAAGTTGG CGCCCCTCTA CGCGCAGGCG TTGGTCGGCA TGGTGGCACT CACCGGGCAG
TGGTGGCTCG ACGCGCGTAA ACCCAAACGC AACGAGGTGG CCGCCCACCT GGTGAACCTC
GCGTGGAACG GGTTGTCCAA CTTGGAGCAC AAACCGAGGC TGCGGCTCCG GCGCAAGCAG
TGA
 
Protein sequence
MTGAERRQQL LDVARSLFAE KGFDGTSIEE IANRANVSKP VVYEHFGGKE GIYAVVVDRE 
TRLLLDRMVS TLHGGHPREL LEQAAVALLS YVEDCHDGFR ILVRDSPVAS STGTFSTLLN
DIASQVEYVL AQEFDSRGYD DKLAPLYAQA LVGMVALTGQ WWLDARKPKR NEVAAHLVNL
AWNGLSNLEH KPRLRLRRKQ