Gene Svir_32280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32280 
Symbol 
ID8388552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3499364 
End bp3500332 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content71% 
IMG OID644977255 
ProductMazG family protein 
Protein accessionYP_003135027 
Protein GI257057195 
COG category[R] General function prediction only 
COG ID[COG3956] Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 
TIGRFAM ID[TIGR00444] MazG family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.601071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.17675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGT TCCCGGCTGT GTCGGCCACG GTGGTGCTGG TATCACCGAC GTTGCCTGAA 
GTACTACCCA CTGCGGCGTG GCCTGCGCTC AGGGCGGCCG AGACGGTGTA CGCCTCGGCG
GACCTGCCCG AGGCGACCAG GGCGGCGCTC GACGCCAAGG CCGCGCCGCA TCCGGACGAA
CTCGTCCGCG CCTCCCGGAT GGTGCTCGTC ACCACGCGTC CGGACGATCC CGGTGCGGCG
GTGCTCGTGC GACGCGGTGC GGCGGTGATC GACACCCCCG TACCGCCTCT CGTGCGTGCC
GTCGAGGTGA TGGATCGACT GCGTTCGCCG GGCGGTTGTC CCTGGGATGC CGCGCAGACC
CACGAGTCGT TGCTGCAATA TCTCGTGGAG GAGACCTACG AGCTGCTCGA CGCCGTCGAG
GAGGGCGATC GGTCCGCGAT GCGGGAGGAG CTCGGTGACG TGTTGCTCCA GGTGCTGTTC
CACGCGCGGG TGGCCGCCGA GCACGACACC GATCCCTTCG ACATCGACGC GGTCGCCGAC
GAGTTGGTCA CCAAGCTGGT GAACAGGCAT CCGCACGTGT TCACCGGCGC CGAGGCCGTG
CACACGGCGG AACACCAGCA GCAGCGGTGG GAACAGCTGA AGCAGGCCGA GAAACGGCGC
GAGTCGATCG TCGACGGGGT TCCCCTGGGC CAACCCGCGG CGGCGCTCGC GGGCAAGTTG
GGGCAACGCA CCGGACGTCG CGGCGTGCCG TCGGACCTGT TCCCGGCCGG CTCCGATGAG
GGGGCGAAAC TGTTCCGGAT CGCCGCCGCG GCCCGTCGGG CGGGCATCGA TCCGGAAGGT
GCGTTGCGCG CGACGGCGAA GGAGTTCGCG AGGAAGGTGC GTGCCGCCGA GCGGGCCGCC
CGCGCCCACG GCTTCGACCC GGCGACGCTC GACGCGGACG GTTGGCGTCG TTTCTGGCCA
CGGGACTGA
 
Protein sequence
MTSFPAVSAT VVLVSPTLPE VLPTAAWPAL RAAETVYASA DLPEATRAAL DAKAAPHPDE 
LVRASRMVLV TTRPDDPGAA VLVRRGAAVI DTPVPPLVRA VEVMDRLRSP GGCPWDAAQT
HESLLQYLVE ETYELLDAVE EGDRSAMREE LGDVLLQVLF HARVAAEHDT DPFDIDAVAD
ELVTKLVNRH PHVFTGAEAV HTAEHQQQRW EQLKQAEKRR ESIVDGVPLG QPAAALAGKL
GQRTGRRGVP SDLFPAGSDE GAKLFRIAAA ARRAGIDPEG ALRATAKEFA RKVRAAERAA
RAHGFDPATL DADGWRRFWP RD