Gene Svir_32260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32260 
Symbol 
ID8388550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3497850 
End bp3498380 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID644977253 
Producthypothetical protein 
Protein accessionYP_003135025 
Protein GI257057193 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.581641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.17555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGC ACGCTATGAG CGACGAAGCC CCGAGGTATC TCGGCCTCGC GCCGTACCTG 
TACTACACCG ACGCCACGGA GGCCGTGGAG TGGTTGACGA GGGTGTTCGG TTTCCGGGAG
AAGGTGCGTT ACGTCGACGC CGCGGGTGAG GTGTTCCAGG CGACACTGTT GGCGGGTGAC
GCGGAGATCC AGGTGACCGC TGTCGACTCG ACCTATTGGG AGGCCAAGGG AGTCGACGGA
CCCGTCGGTC AGCTCAACGT CGTGTACGTC GACGACGTCG ACGCCCAGTA CGAGAGGGTC
CGTGCCGCGG TCGGTGAGTC GGTGGAACTC ACCACGCCAC AGGACCAGCC CTACGGAGCG
CGACTGTTCA CGGTGCAGGA CGTCGGAGGC AACAGCTGGA CGTTCTGGCA GCACATCTCC
GACGTGGTGG ACCTGCCCGT GGGCTGGCAG GAGATCCGAG CCGAGGACGG CCAGAACGCG
GTGACACGGA AGAACATCGA ACAATCCGAG AGGGAACACG AGCTCGGCTG A
 
Protein sequence
MDLHAMSDEA PRYLGLAPYL YYTDATEAVE WLTRVFGFRE KVRYVDAAGE VFQATLLAGD 
AEIQVTAVDS TYWEAKGVDG PVGQLNVVYV DDVDAQYERV RAAVGESVEL TTPQDQPYGA
RLFTVQDVGG NSWTFWQHIS DVVDLPVGWQ EIRAEDGQNA VTRKNIEQSE REHELG