Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32260 |
Symbol | |
ID | 8388550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3497850 |
End bp | 3498380 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644977253 |
Product | hypothetical protein |
Protein accession | YP_003135025 |
Protein GI | 257057193 |
COG category | [S] Function unknown |
COG ID | [COG2764] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.581641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.17555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTGC ACGCTATGAG CGACGAAGCC CCGAGGTATC TCGGCCTCGC GCCGTACCTG TACTACACCG ACGCCACGGA GGCCGTGGAG TGGTTGACGA GGGTGTTCGG TTTCCGGGAG AAGGTGCGTT ACGTCGACGC CGCGGGTGAG GTGTTCCAGG CGACACTGTT GGCGGGTGAC GCGGAGATCC AGGTGACCGC TGTCGACTCG ACCTATTGGG AGGCCAAGGG AGTCGACGGA CCCGTCGGTC AGCTCAACGT CGTGTACGTC GACGACGTCG ACGCCCAGTA CGAGAGGGTC CGTGCCGCGG TCGGTGAGTC GGTGGAACTC ACCACGCCAC AGGACCAGCC CTACGGAGCG CGACTGTTCA CGGTGCAGGA CGTCGGAGGC AACAGCTGGA CGTTCTGGCA GCACATCTCC GACGTGGTGG ACCTGCCCGT GGGCTGGCAG GAGATCCGAG CCGAGGACGG CCAGAACGCG GTGACACGGA AGAACATCGA ACAATCCGAG AGGGAACACG AGCTCGGCTG A
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Protein sequence | MDLHAMSDEA PRYLGLAPYL YYTDATEAVE WLTRVFGFRE KVRYVDAAGE VFQATLLAGD AEIQVTAVDS TYWEAKGVDG PVGQLNVVYV DDVDAQYERV RAAVGESVEL TTPQDQPYGA RLFTVQDVGG NSWTFWQHIS DVVDLPVGWQ EIRAEDGQNA VTRKNIEQSE REHELG
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