Gene Svir_32210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32210 
Symbol 
ID8388545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3492857 
End bp3493813 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID644977248 
ProductPpx/GppA phosphatase 
Protein accessionYP_003135020 
Protein GI257057188 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.188843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGGG TAGCTGCCAT CGACTGCGGG ACCAACTCCA TCCGCCTACT GGTCGCGGAG 
CTCACGTACC GGCACGACGG AAGCGTCGAT CTGCGAGACC TGCACCGGGA GATGCGCATC
GTGCGGCTCG GTCAGGGGGT CGACGCGACC GGGGAGCTGG CGCCGGAGGC GTTGGAGCGC
ACGCGCGAGG CCCTGAAGGC GTACGCGATC GCGGCCCGGC GCAAAGGGGT GGAGCGGCTA
CGCATGGTGG CGACGTCGGC CACGCGTGAC GCGAGCAACC GGGACGAGTT CTTCACGATG
ACGCGGGAAC TGCTCGGTAC GGAGGCCGAG GTCATCACCG GCGAGGAAGA GGCCAGACTC
TCGTTCACCG GAGCGGTCGG TGAGCAGGAC CCCGATGACG GACCGTTCCT GGTGGTCGAT
GTCGGCGGCG GCTCCACCGA ACTCGTGCTC GGCACCTGGA ACGGGCGGGA GGCCGACGTG
TGGGCCTCGC ACTCGGTGGA CATCGGGTGT GTTCGCCTCA CCGAACGTGT GTTGCGGTCG
GACCCGCCCA CGGCCGACGA ACTCGCCGAG GCCGAACGGG TGGCGGTGCG CACGTTGGAG
CCCGCGTTCG AGGCGGTGGA CGTGTCGAGG GCCGGTCGGT GGATCGGTCT GGCGGGCACG
ATCACGACCC TGTCGGCGAT AGCGCAGGAT CTGCCCGAAT ACGACTCCGA ACGCATACAC
CTGTCGACGC TTTCCCGTGA CGACCTGGAC ACGGTGGTCC GCGATCTCCT CGCCGCCGAC
CGCGCCATGC GCGCCGCGAT TCCGGTGATG CATCCCGGCC GGGTGGACGT CATCGGAGGT
GGAGCGCTGA TCGTGCGCGT ACTGGCCGAG CAGATCGCCC AGCGAGGGGG CCCCGCCGAC
CCGCTGGTGG TCAGCGAACA CGACATCCTC GACGGCATCG CTTTGTCACT CGCCTGA
 
Protein sequence
MPRVAAIDCG TNSIRLLVAE LTYRHDGSVD LRDLHREMRI VRLGQGVDAT GELAPEALER 
TREALKAYAI AARRKGVERL RMVATSATRD ASNRDEFFTM TRELLGTEAE VITGEEEARL
SFTGAVGEQD PDDGPFLVVD VGGGSTELVL GTWNGREADV WASHSVDIGC VRLTERVLRS
DPPTADELAE AERVAVRTLE PAFEAVDVSR AGRWIGLAGT ITTLSAIAQD LPEYDSERIH
LSTLSRDDLD TVVRDLLAAD RAMRAAIPVM HPGRVDVIGG GALIVRVLAE QIAQRGGPAD
PLVVSEHDIL DGIALSLA