Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32140 |
Symbol | |
ID | 8388538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3482504 |
End bp | 3483292 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977241 |
Product | acetoin reductase family protein |
Protein accession | YP_003135014 |
Protein GI | 257057182 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR02415] acetoin reductases |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.206629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCA CAGACCAGCG CACCGCCATC GTGACCGGCG CTGCTCGCGG TATCGGCAAG GGTATCGCCG AGCGGCTGGC GCGGGACGGA CTCGCCGTCG CCGTGGCCGA CCTCGACTCC ATGCGCGAGG AGTTGAACGG CGTCGCGCAG GGCATCGAAC GATCCGGTGG CCTGGCCACC ACCCTCACCG CGGACGTCAG CGACCCGGAA CAGGTCAACA CCCTGGTGCG CGACACCGTG CAGCGGCTCG GCAGGCTCGA CGTGTTCGTC GCCAACGCGG GCATCGCGGC GGTCGACCCG TTGCTGGACA CCACGCTCGA CGAGTTGGAC AGGCTCGTGC GGGTGAACCT GTACGGGGTG TTCAACTGCT ACCAGGCCGC GGCGCGTCAG ATGATCGAGC AGGGCACCGG CGGGAAGATC ATCGGTGCCG CGTCCATCGC GGCGCACAAG GGCTTCGAGA TGCTCGGCGG CTACTCCGTC ACCAAATGGG GGGTGCGAGG GCTCACCCAG GTGGCGGCAC AGGAGTGGGC CCGACACGGC ATCACCGTGA ACGCCTACTG CCCCGGCATC GTCGGCACGG CCATGTGGGA TCTCATCGAC GAGAAGATGA CCCAGCGCAC GGGCGAGGAA CGGGGTGCGG CCATGAAGCG GTTCTCCGAG TCGATCGCGC TGGGCCGGGT CGAGAGGCCG GAGGACGTGG CGGCGTTCGT GTCGTACCTG GCTTCCCGTG ACTCCGACTA CATGACCGGG CAGTCGGTAC TGATCGACGG GGGCATCATC TACAGCTGA
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Protein sequence | MTSTDQRTAI VTGAARGIGK GIAERLARDG LAVAVADLDS MREELNGVAQ GIERSGGLAT TLTADVSDPE QVNTLVRDTV QRLGRLDVFV ANAGIAAVDP LLDTTLDELD RLVRVNLYGV FNCYQAAARQ MIEQGTGGKI IGAASIAAHK GFEMLGGYSV TKWGVRGLTQ VAAQEWARHG ITVNAYCPGI VGTAMWDLID EKMTQRTGEE RGAAMKRFSE SIALGRVERP EDVAAFVSYL ASRDSDYMTG QSVLIDGGII YS
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