Gene Svir_32140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32140 
Symbol 
ID8388538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3482504 
End bp3483292 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID644977241 
Productacetoin reductase family protein 
Protein accessionYP_003135014 
Protein GI257057182 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR02415] acetoin reductases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.206629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA CAGACCAGCG CACCGCCATC GTGACCGGCG CTGCTCGCGG TATCGGCAAG 
GGTATCGCCG AGCGGCTGGC GCGGGACGGA CTCGCCGTCG CCGTGGCCGA CCTCGACTCC
ATGCGCGAGG AGTTGAACGG CGTCGCGCAG GGCATCGAAC GATCCGGTGG CCTGGCCACC
ACCCTCACCG CGGACGTCAG CGACCCGGAA CAGGTCAACA CCCTGGTGCG CGACACCGTG
CAGCGGCTCG GCAGGCTCGA CGTGTTCGTC GCCAACGCGG GCATCGCGGC GGTCGACCCG
TTGCTGGACA CCACGCTCGA CGAGTTGGAC AGGCTCGTGC GGGTGAACCT GTACGGGGTG
TTCAACTGCT ACCAGGCCGC GGCGCGTCAG ATGATCGAGC AGGGCACCGG CGGGAAGATC
ATCGGTGCCG CGTCCATCGC GGCGCACAAG GGCTTCGAGA TGCTCGGCGG CTACTCCGTC
ACCAAATGGG GGGTGCGAGG GCTCACCCAG GTGGCGGCAC AGGAGTGGGC CCGACACGGC
ATCACCGTGA ACGCCTACTG CCCCGGCATC GTCGGCACGG CCATGTGGGA TCTCATCGAC
GAGAAGATGA CCCAGCGCAC GGGCGAGGAA CGGGGTGCGG CCATGAAGCG GTTCTCCGAG
TCGATCGCGC TGGGCCGGGT CGAGAGGCCG GAGGACGTGG CGGCGTTCGT GTCGTACCTG
GCTTCCCGTG ACTCCGACTA CATGACCGGG CAGTCGGTAC TGATCGACGG GGGCATCATC
TACAGCTGA
 
Protein sequence
MTSTDQRTAI VTGAARGIGK GIAERLARDG LAVAVADLDS MREELNGVAQ GIERSGGLAT 
TLTADVSDPE QVNTLVRDTV QRLGRLDVFV ANAGIAAVDP LLDTTLDELD RLVRVNLYGV
FNCYQAAARQ MIEQGTGGKI IGAASIAAHK GFEMLGGYSV TKWGVRGLTQ VAAQEWARHG
ITVNAYCPGI VGTAMWDLID EKMTQRTGEE RGAAMKRFSE SIALGRVERP EDVAAFVSYL
ASRDSDYMTG QSVLIDGGII YS