| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32120 |
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| Symbol | |
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| ID | 8388536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3481212 |
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| End bp | 3481862 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977239 |
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| Product | ribulose-5-phosphate 4-epimerase-like epimerase or aldolase |
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| Protein accession | YP_003135012 |
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| Protein GI | 257057180 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.441837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.216686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTTG CCGAACACCG CGAAGCCGTG TGCGCCTATG CCCGCAGGAT GGTCGCCGAC
GGGCTCGTCG TCGGCACGTC CGGGAACATC TCGGTGCGGG AGGGCGATCT CGTGGCCGTC
ACGCCGACCG GCGTGGACTA CGAGTCGTTG CGTCCGGAGG ACATCCCCGT ACTGCGGCTC
GACGGCACCC CGGTGGAGGG CGACCTGAAG CCGACCAGCG AGATGCCGAT GCACCTGGCG
ATCTACCGCG ACGCCAAGGA CCCGGACGGG GCCGACATCA ACGCGGTGGT GCACACCCAC
TCCACCCACG CCGTCGCTGT GTCCACTGTG GTCGACGAGG TGCCGCCGGT GCACTACATG
GTCGCGGCCA TCGGCCCGAG CGTGCGTGTC GCACCGTACG CCACGTACGG CACGCAGGAG
CTCGCCGACG TCATGCTCAC CGCGTTGGAC GGGCGACGCG GCTGTCTGCT CGGCAACCAC
GGCACCGTCA CCTACGGCAC CGATCTCGCA GCGGCGTACT CCCGCGCGCA GCAGCTGGAG
TGGGTGTGCC AGGTGTGGTT GATGGCGCGT TCGGTCGGTT CCCCCCGACT CCTGCCGCGC
GCCGAGATCG GGCACGTGGT CGAACGGCTG CGCGGCTACG GCCAGAAGTA G
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| Protein sequence | MLLAEHREAV CAYARRMVAD GLVVGTSGNI SVREGDLVAV TPTGVDYESL RPEDIPVLRL
DGTPVEGDLK PTSEMPMHLA IYRDAKDPDG ADINAVVHTH STHAVAVSTV VDEVPPVHYM
VAAIGPSVRV APYATYGTQE LADVMLTALD GRRGCLLGNH GTVTYGTDLA AAYSRAQQLE
WVCQVWLMAR SVGSPRLLPR AEIGHVVERL RGYGQK
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