Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32050 |
Symbol | |
ID | 8388529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3473247 |
End bp | 3474539 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977232 |
Product | nitrate/nitrite transporter |
Protein accession | YP_003135005 |
Protein GI | 257057173 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00897] polyol permease family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.531313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.358541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCCGGC TGCTGGACCG TTGGGGCATT CCCGCGCCCC TGTTCCTCGG CTACGTCGGT CTGCTGTTGT TCATGATCGG CGACGGCATC GAGTCCGGCT TCATCGCTCC GTTCATCGCC GACAACGGCG CGGGAACCGA AGTCCGTGCG TCCTACGTCA TCACCGTGTA CGGCGTCGCG GTGATGCTGG CGTCCTGGCT GTCGGGCGCG TTGTCCGAGC TCTGGGGGCC ACGGCGGGTC ATGTTCATCG GCCTCGCCGT CTGGCTCGTC TTCGACGTGC TCTTCCTCGC CGTGGCCGTG ACGGGGGAGA ACTACGCACT GATGCTGGTG TTCTACGGCT TGCGCGGGTT CGGCTACCCC ATGTTCGCCT TCGGTTTCCT CGTGTGGATC ACGGCCGTGG CGCCCGTGGC GAGGCTGGGC GCGGCCGTCG GCTGGTTCTA CTTCGCGTTC ACCGGCGGGC TGCCCACCCT GGGGTCGCTG GTCGCCAGCT TCACCAACCC GATCCTCGGC CAGTACGGAA CCCTGTGGTT GTCCGTGGGT GTTCTCGCCC TCGGCGGCCT GGTGTGTCTG CTCGGCGTGC GGGAGCGCAC CGGCTACCAG CGGCTCGCAC CTGCCGAGGT CAAGCCCGTG CAGAGCCTGG TGTCGAGCCT GTCCATCGCG TGGAAGAAGC CCCGGGTCGG GATCGGCATG ATCGTGCGGA TCATCAACAC CGCACCCGAG TTCGGCATGT TGGTGTTCTT CCCGACGATC TTCAGTCACC AGATCGGTTT CGGGGAGAGC CGCTGGCTGC TGTTGGTGTC CGTCATCTAC GGGACCAACA TCTTCTTCAA CCTGATCTTC GGAGTGCTCA GCGACAAGAT CGGTTGGCAG ACGACCATCT TCTGGTTCGG CGCCATCGGC TGTGCCGTGT CGATCCTGTT GCTGTACTTC GTGCCGATGC ACCTCGGGGC GGACTACTAC TGGGTGGCGC TGCTCGTGGG AGCGCTCTAC GGCGCGACGT TGGCGGGCTT CGTGCCGATC TCGGCGTTGC TGCCCTCGCT CGCCCCCGAG AACAAGGGTG GCGCGATGGC GCTGCTGAAC TTCGGTGCCG GTGCGGCGAC CTTCGTGGGA CCGGCGATCG TGAGCCTGTT CCTGGGGCCC GTGGGGGCTG CCGGAGTGGT CATCATCTTC GCGGCGTTGT ACGTCGTCGC CGCCGTGCTC ACCCGGTTCC TCACGTTGCC CGAGGCGACG AAGAAGGCGG TCGAGAAGAA CGCGAGCCTG CAGGAGGTCG CGGAGGTGCC GGCGACCTCG TAA
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Protein sequence | MSRLLDRWGI PAPLFLGYVG LLLFMIGDGI ESGFIAPFIA DNGAGTEVRA SYVITVYGVA VMLASWLSGA LSELWGPRRV MFIGLAVWLV FDVLFLAVAV TGENYALMLV FYGLRGFGYP MFAFGFLVWI TAVAPVARLG AAVGWFYFAF TGGLPTLGSL VASFTNPILG QYGTLWLSVG VLALGGLVCL LGVRERTGYQ RLAPAEVKPV QSLVSSLSIA WKKPRVGIGM IVRIINTAPE FGMLVFFPTI FSHQIGFGES RWLLLVSVIY GTNIFFNLIF GVLSDKIGWQ TTIFWFGAIG CAVSILLLYF VPMHLGADYY WVALLVGALY GATLAGFVPI SALLPSLAPE NKGGAMALLN FGAGAATFVG PAIVSLFLGP VGAAGVVIIF AALYVVAAVL TRFLTLPEAT KKAVEKNASL QEVAEVPATS
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