Gene Svir_32050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32050 
Symbol 
ID8388529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3473247 
End bp3474539 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID644977232 
Productnitrate/nitrite transporter 
Protein accessionYP_003135005 
Protein GI257057173 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00897] polyol permease family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.531313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.358541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGGC TGCTGGACCG TTGGGGCATT CCCGCGCCCC TGTTCCTCGG CTACGTCGGT 
CTGCTGTTGT TCATGATCGG CGACGGCATC GAGTCCGGCT TCATCGCTCC GTTCATCGCC
GACAACGGCG CGGGAACCGA AGTCCGTGCG TCCTACGTCA TCACCGTGTA CGGCGTCGCG
GTGATGCTGG CGTCCTGGCT GTCGGGCGCG TTGTCCGAGC TCTGGGGGCC ACGGCGGGTC
ATGTTCATCG GCCTCGCCGT CTGGCTCGTC TTCGACGTGC TCTTCCTCGC CGTGGCCGTG
ACGGGGGAGA ACTACGCACT GATGCTGGTG TTCTACGGCT TGCGCGGGTT CGGCTACCCC
ATGTTCGCCT TCGGTTTCCT CGTGTGGATC ACGGCCGTGG CGCCCGTGGC GAGGCTGGGC
GCGGCCGTCG GCTGGTTCTA CTTCGCGTTC ACCGGCGGGC TGCCCACCCT GGGGTCGCTG
GTCGCCAGCT TCACCAACCC GATCCTCGGC CAGTACGGAA CCCTGTGGTT GTCCGTGGGT
GTTCTCGCCC TCGGCGGCCT GGTGTGTCTG CTCGGCGTGC GGGAGCGCAC CGGCTACCAG
CGGCTCGCAC CTGCCGAGGT CAAGCCCGTG CAGAGCCTGG TGTCGAGCCT GTCCATCGCG
TGGAAGAAGC CCCGGGTCGG GATCGGCATG ATCGTGCGGA TCATCAACAC CGCACCCGAG
TTCGGCATGT TGGTGTTCTT CCCGACGATC TTCAGTCACC AGATCGGTTT CGGGGAGAGC
CGCTGGCTGC TGTTGGTGTC CGTCATCTAC GGGACCAACA TCTTCTTCAA CCTGATCTTC
GGAGTGCTCA GCGACAAGAT CGGTTGGCAG ACGACCATCT TCTGGTTCGG CGCCATCGGC
TGTGCCGTGT CGATCCTGTT GCTGTACTTC GTGCCGATGC ACCTCGGGGC GGACTACTAC
TGGGTGGCGC TGCTCGTGGG AGCGCTCTAC GGCGCGACGT TGGCGGGCTT CGTGCCGATC
TCGGCGTTGC TGCCCTCGCT CGCCCCCGAG AACAAGGGTG GCGCGATGGC GCTGCTGAAC
TTCGGTGCCG GTGCGGCGAC CTTCGTGGGA CCGGCGATCG TGAGCCTGTT CCTGGGGCCC
GTGGGGGCTG CCGGAGTGGT CATCATCTTC GCGGCGTTGT ACGTCGTCGC CGCCGTGCTC
ACCCGGTTCC TCACGTTGCC CGAGGCGACG AAGAAGGCGG TCGAGAAGAA CGCGAGCCTG
CAGGAGGTCG CGGAGGTGCC GGCGACCTCG TAA
 
Protein sequence
MSRLLDRWGI PAPLFLGYVG LLLFMIGDGI ESGFIAPFIA DNGAGTEVRA SYVITVYGVA 
VMLASWLSGA LSELWGPRRV MFIGLAVWLV FDVLFLAVAV TGENYALMLV FYGLRGFGYP
MFAFGFLVWI TAVAPVARLG AAVGWFYFAF TGGLPTLGSL VASFTNPILG QYGTLWLSVG
VLALGGLVCL LGVRERTGYQ RLAPAEVKPV QSLVSSLSIA WKKPRVGIGM IVRIINTAPE
FGMLVFFPTI FSHQIGFGES RWLLLVSVIY GTNIFFNLIF GVLSDKIGWQ TTIFWFGAIG
CAVSILLLYF VPMHLGADYY WVALLVGALY GATLAGFVPI SALLPSLAPE NKGGAMALLN
FGAGAATFVG PAIVSLFLGP VGAAGVVIIF AALYVVAAVL TRFLTLPEAT KKAVEKNASL
QEVAEVPATS