| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32030 |
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| Symbol | |
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| ID | 8388527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3472243 |
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| End bp | 3472626 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644977230 |
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| Product | anti-anti-sigma factor |
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| Protein accession | YP_003135003 |
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| Protein GI | 257057171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.320357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.297134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGAAA GCGACACATC GCCCACCATG AAATCCTCGG CGCAATTCGA AAAATCAGAA
CATTCGACGG TGCACGCCGA GTTGGTGCGC AACGAAGGGT TCGTCACGCT GTGTGGGGAG
ATCGACCACA GTGTGACTCC GCAGCTCGAC GACGCCCTCA CCCAACTGTT GGCCGAGAAG
GTCGACCGCC TGGTGGTGGA TTTCGCGCGA CTGTCGTTCT TCGATTCCGC CTGTATCGGC
GCCCTCGTCC GCGCTCATGC GAGCGTGACG GAACGCGGTG GAACGGTGAA ACTCGTCAAC
GTCGACCAAT ATGCCTACCG GGTACTGCAA ATCGCCGGTT TGCTGCCGTT CTTCGATATC
GAGCGGATCG AACGGGAAGT GTAG
|
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| Protein sequence | MTESDTSPTM KSSAQFEKSE HSTVHAELVR NEGFVTLCGE IDHSVTPQLD DALTQLLAEK
VDRLVVDFAR LSFFDSACIG ALVRAHASVT ERGGTVKLVN VDQYAYRVLQ IAGLLPFFDI
ERIEREV
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