Gene Svir_31770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31770 
Symbol 
ID8388501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3447501 
End bp3448370 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content57% 
IMG OID644977204 
Producthypothetical protein 
Protein accessionYP_003134977 
Protein GI257057145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGTCG CAACGCCGGT CGGCCACCTG TTTTTCGCCA GCCCTGAAAG ACCTGATGGG 
CGTGTCTGTA CCGGGGTGGC AGAACATATA GGGCTGTTCT GTCTCGTGCC GAGCGGCCAG
CTCGGTTCCG GTGTCGTCCT TTCCATCGTG ATTCTTGTCG TCGTCGCAAG TGGGTGGCGT
CCGCGAATCA CGGCTATTCC GCACTGGTGG ATATCTTTTT CTTTCTACTC CACCACCAAT
GTCGTGGACG GTGGCGATCA AGTCGCTGCT GTGGTCACAT TCCTTCTGAT ACCGATCTGT
GTCACGGACC GTCGTCGATG GCACTGGCAG AGTCCGGTGG TGACCCGGCA ATCAGCGAGA
GTGGTCGCTC ATCTCTCGCT TGTCTTGATT TGGATCCAAG CCTCCATCTT ATATCTGCAC
GCAAGCGTTT CCAAATTAGG TGTCCTCGAG TGGCGTGATG GTTCGGCTGT CTGGTATTGG
ATGATGTTCC CGCCGTTCAG TGTTCCGGAA TACATGAAAC CTGCGGTGGG ATTCGTCTTG
TCGCACGGCC CCGCCGTGCT CGCCATAACA TGGGGGACCT TGGCCATAGA GTTCTTCTTG
GCATGGTGTG TTTTCGCGCG CCAAGCGGTT CGCATGGCGG GTCTCGTCGC AGGGTGGACG
CTCCATGCTG CGATCGCGAT CGCGCTCGGT TTGCCCGGAT TCTCGTCGAT CATGTTCGCC
TTGCTGATCT TATATTTGGT GAGACCCGGG GATTCAATAC CGCGACCACT TTCATTCGTC
ACCCGTTTGT CAGAATTCTT CGATGTTAAG ATGGTCGAGC TGAGGGTGCG CAAGGCGGAA
CGGGGGCAGA AGGTGGCGGA GGGATCATGA
 
Protein sequence
MSVATPVGHL FFASPERPDG RVCTGVAEHI GLFCLVPSGQ LGSGVVLSIV ILVVVASGWR 
PRITAIPHWW ISFSFYSTTN VVDGGDQVAA VVTFLLIPIC VTDRRRWHWQ SPVVTRQSAR
VVAHLSLVLI WIQASILYLH ASVSKLGVLE WRDGSAVWYW MMFPPFSVPE YMKPAVGFVL
SHGPAVLAIT WGTLAIEFFL AWCVFARQAV RMAGLVAGWT LHAAIAIALG LPGFSSIMFA
LLILYLVRPG DSIPRPLSFV TRLSEFFDVK MVELRVRKAE RGQKVAEGS