Gene Svir_31710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31710 
Symbol 
ID8388495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3439259 
End bp3439828 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content67% 
IMG OID644977198 
Producthypothetical protein 
Protein accessionYP_003134971 
Protein GI257057139 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.547253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC AGGGGGCGAC AACACGTAAG CGCACACGCG GTCCCAACGA CCCTGACCGA 
CGCAACCGCA TTGCCCGCGC GGCCATCACC GTCATCGCCG AACGCGGCAT CAACGCATTG
ACCCATCGCA TGGTCGCCGC CGAAGCCGGT GTGCCGCTCG GCTCGACCAC CTATCACTTC
GCCACGCTCG ACGACCTCGT CGCCGTCGCT CTGGACGAAG CGGCACGACG CAACATCGAC
GCGCTGCGCG AATGGAACGC CGCGCTTCCG GAGGACGTGG ACCTGGTGAC CGCCCTCACC
GATCTCGTCC TCGACTCGGT GACGAAGCAA CGCGCCGACA CCATCGCCGA GTACAACCTC
TACGCCCTCG CCCTTCAACG TCCCCACCTA CGCAGGGCGG CGGTCGCCTG GGACAACGCG
CTGGCGGACG TGTTCAGCAC CCGCACCGAT CCGCTCACCG GCAGGATGAT CGCCACATTG
ACGTGCGGGT TGATGATGCA GACCGTACTC GGGGAAACCC CACCGCGTCG GGAGGACATC
GAAGCGCTCT ACCGACGCGC ACTGGGCTAG
 
Protein sequence
MTAQGATTRK RTRGPNDPDR RNRIARAAIT VIAERGINAL THRMVAAEAG VPLGSTTYHF 
ATLDDLVAVA LDEAARRNID ALREWNAALP EDVDLVTALT DLVLDSVTKQ RADTIAEYNL
YALALQRPHL RRAAVAWDNA LADVFSTRTD PLTGRMIATL TCGLMMQTVL GETPPRREDI
EALYRRALG