Gene Svir_31570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31570 
Symbol 
ID8388481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3423553 
End bp3424905 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content68% 
IMG OID644977184 
ProductPhoH family protein 
Protein accessionYP_003134957 
Protein GI257057125 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCCGAA AGGACTCCGG CCGCTCATCC GACTCCGGTG ACACAGCTGA CCGAACACGT 
ACGTACGTGC TGGACACGTC GGTCCTGCTG TCGGACCCGT GGGCGATCAC CCGGTTCGCA
GAGCACCACG TGGTGCTGCC GCTCGTGGTG ATCAGCGAGC TGGAGGCGAA ACGCCATCAT
CCCGAACTCG GGTGGTTCGC CAGAGAGGCC CTTCGGCTGC TGGACGAGCT CAGGCGCACG
CACGGCCGCC TCGACGTGCC GGTGCCGATC GGGGAGGAAG GCGGCACGGT GCACGTGGAG
TTGAACCACT CCGACCCCAC GGTGCTCCCA CCTGGATTCC GCACCGACTC CAACGACCAC
CGCATCCTCG CCTGCGCGTT GAACCTCGCC AACGAACGTC AGGAGGTGTC CTTGATCACC
AAGGACATCC CCCTGCGGGT GAAGGCCGGT TCGGTGGGAT TGACCGCCGA CGAGTATCGG
GCCGACGAGG TGACCCCGTC CGGGTGGACG GGCATGGCCG ACCTCGACGT CCCCGCCGAG
GCCATCGACG CCCTGTTCGC GTCGGGCGAG GTGGACCTGG CCGATTTCGG TCTTCCCGAG
GCGCGTGAGC TGCCGTGCAA CACCGGTCTC CGCCTGCTCG CGGGGACGAC GAGCGCGCTG
GCGCGGACCA CACCCAGCAA GAGGGCACGA CTCGTCCGCG GTGACCGGGA GGTGTTCGGC
CTCCACGGAC GGTCGGCGGA ACAGCGCATC GCGTTGGACC TGCTCATGGA CCCCGACATC
GGCATCGTGT CCCTCGGCGG ACGCGCGGGC ACGGGGAAGT CGGCACTCGC GCTGTGCGCC
GGGCTCGAAG CCGTTCTCGA ACGCGGGATG CACCGCAAGA TCATGGTGTT CCGTCCGGTG
TACGCGGTCG GGGGACAGGA TCTGGGCTAT CTGCCGGGCA CCGAGAACGA GAAGATGCAG
CCCTGGGCCC AGGCCGTGTT CGACACCCTC GGTGCGTTGG TCAGCCAGGA AGTGATCGAC
GAGGTGTTCG ATCGCGGCAT GCTGGAGGTG CTGCCGCTCA CCCACATCCG GGGACGGTCG
CTGCACGACT CGTTCGTGAT CGTGGACGAG GCGCAGTCGC TGGAGCGCAA CGTGCTGTTG
ACGGTGTTGT CGCGACTGGG CACGGGGTCC CGGGTGGTGT TGACCCACGA CGTGGCGCAG
CGCGACAACC TGCGTGTCGG CAGGCACGAC GGGGTGTCAG CGGTGGTCGA GAAGCTGAAG
GGGCATCCGC TGTTCGCGCA CCTGACGTTG ACGCGCTCCG AGCGTTCTCC GATCGCTGCT
TTGGTCACCG AGATGCTGGA GTACCACGGG TGA
 
Protein sequence
MPRKDSGRSS DSGDTADRTR TYVLDTSVLL SDPWAITRFA EHHVVLPLVV ISELEAKRHH 
PELGWFAREA LRLLDELRRT HGRLDVPVPI GEEGGTVHVE LNHSDPTVLP PGFRTDSNDH
RILACALNLA NERQEVSLIT KDIPLRVKAG SVGLTADEYR ADEVTPSGWT GMADLDVPAE
AIDALFASGE VDLADFGLPE ARELPCNTGL RLLAGTTSAL ARTTPSKRAR LVRGDREVFG
LHGRSAEQRI ALDLLMDPDI GIVSLGGRAG TGKSALALCA GLEAVLERGM HRKIMVFRPV
YAVGGQDLGY LPGTENEKMQ PWAQAVFDTL GALVSQEVID EVFDRGMLEV LPLTHIRGRS
LHDSFVIVDE AQSLERNVLL TVLSRLGTGS RVVLTHDVAQ RDNLRVGRHD GVSAVVEKLK
GHPLFAHLTL TRSERSPIAA LVTEMLEYHG