Gene Svir_31560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31560 
Symbol 
ID8388480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3421851 
End bp3423290 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID644977183 
Productinosine 5-monophosphate dehydrogenase 
Protein accessionYP_003134956 
Protein GI257057124 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase
[TIGR01303] IMP dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTTC TGGAAGGCCA CAGTCCTACT CACGACCTGA CCTACGACGA CGTCTATCTG 
CTGCCCAGCC GCTCGGCAGT GGAATCACGC TTCGACGTCG ATCTCTCCAC CGTCGACGGC
ACGGGCGCCA CCATCCCGAT CGTGGTCGCG AACATGACCG CCGTCGCGGG ACGGCGCATG
GCCGAGACCG TCGCCCGCCG CGGGGGGATC GTCATCCTGC CCCAGGACGT CGACCCCAGC
GCGGTCGCCG ACATCACGGC GTGGGTGAAG AGCCGGCACC TCGTGTGGGA CACCCCGCTG
GTGCTCACCG CGGGTGACGC GGTGGCCGAC GCGATGAACC TCGTGGGTAA ACGCTCCCAC
GGTGCCGTGG CCGTCGTGGA CGACGACGGC CGTCCCCTCG GCATCGTCAC CGAAGCCGCG
TGTGCCGATG TCGACCGTTT CGCCCGGTTG TCCGAGGTGC TGGAACGGCT GGTGCTCACC
GTTCCGCTCG ACACACCGCC GCGCGAGGTG TACGAGCAAC TGCATCAACG CGGCGAGAAG
CTCGCCCTCG GCGTGGACGA CAACGGCCGT CTCGCGGGTG TGTTGACCCA GGTCGGTGCC
CTCCGCTCCG GTATCTACAC CCCCGCCGTG GACGACAACG GCCGCCTGCG CATCGGCGCG
GCCATCGGGA TCAACGGCGA CGTGGCCGCC AAGGCCGAGG CGGTCCTCGA GGCCGGGGTC
GACGTCCTCG TCGTGGACAC CGCCCACGGC CACCAGGAGA AGATGCTGGC CGCGCTCAAG
GCCGTCCGCT CGGTGTCCCC CTCGGTGCCC GTGGTCGCGG GCAACGTCGT GACCGCGGAA
GGCACTCGCG ACCTCATCGA AGCGGGCGCC GACATCGTCA AGGTGGGTGT CGGGCCCGGC
GCGATGTGCA CGACGCGCAT GATGACCGGT GTGGGTCGCC CACAACTGTC GGCCGTGATC
GACTGCGCGG CCGCGGCCCG GGAGCTCGGC AAGCACGTGT GGGCCGACGG CGGCATCCGC
CACCCGAGGG ACGTCGCGCT GGCCCTCGCC GCGGGCGCGT CGGCGGCCAT GGTGGGGTCG
TGGTTCGCGG GCACGTACGA ATCACCCGGG GACCTGCGCT ACGACGAACA CGGCAGGCCG
TACAAGGAGT CGTTCGGCAT GGCCTCCAAG CGGGCCGTCA CCGCGCGTAC GCGTTCCGAC
AGCGCCTACG AACGCGCCCG CAAGTCGCTG TTCGAGGAAG GCATCTCGTC CTCCCGGATG
GCGCTCGACC CGCAGTCACC CAGCGTGGAG GACCTGCTCG ACTCCATCAC GGCGGGCGTG
CGTTCGGCGT GCACCTACGC GGGCGCGGCC ACCTTGGAGC AGTTCCACGA GCGAGCGGTG
TTGGGCGTGC AGTCACCGGC GGGCTTCGCC GAGGGCCGCC CCCTCCCCAC CGGCTGGTAA
 
Protein sequence
MRFLEGHSPT HDLTYDDVYL LPSRSAVESR FDVDLSTVDG TGATIPIVVA NMTAVAGRRM 
AETVARRGGI VILPQDVDPS AVADITAWVK SRHLVWDTPL VLTAGDAVAD AMNLVGKRSH
GAVAVVDDDG RPLGIVTEAA CADVDRFARL SEVLERLVLT VPLDTPPREV YEQLHQRGEK
LALGVDDNGR LAGVLTQVGA LRSGIYTPAV DDNGRLRIGA AIGINGDVAA KAEAVLEAGV
DVLVVDTAHG HQEKMLAALK AVRSVSPSVP VVAGNVVTAE GTRDLIEAGA DIVKVGVGPG
AMCTTRMMTG VGRPQLSAVI DCAAAARELG KHVWADGGIR HPRDVALALA AGASAAMVGS
WFAGTYESPG DLRYDEHGRP YKESFGMASK RAVTARTRSD SAYERARKSL FEEGISSSRM
ALDPQSPSVE DLLDSITAGV RSACTYAGAA TLEQFHERAV LGVQSPAGFA EGRPLPTGW