| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31480 |
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| Symbol | ispH |
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| ID | 8388472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3413833 |
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| End bp | 3414816 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644977175 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003134948 |
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| Protein GI | 257057116 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.155502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.841191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG CGAGCCCCAC TTCGAACGGC AAGCGTGTCC TGCTGGCCAA ACCGCGTGGC
TACTGCGCCG GCGTGGATAG GGCTGTCGTC ACTGTGGAGA AGGCCCTGGA GAAGTACGGT
CCTCCCATCT ACGTCCGCAA GGAGATCGTT CACAACAAGT ACGTGGTGGA CACGCTGCGG
AAACGCGGTG TGATCTTCGT CGATGAGACC TCCGAGGTGC CAGAGGGCTC GCTGGTGGTG
TTCTCCGCGC ACGGTGTGTC GCCCGCCGTG CACGCCGAGG CGGCGGAACG CAATCTCCGC
ACCATCGATG CCACGTGTCC GCTCGTGACC AAGGTGCACC GAGAGGTCGT CCGGTTCGCC
CGCGACGACT ACGACATCCT GCTCATCGGA CACGAGGGAC ACGAGGAGGT CGAGGGCACG
GCCGGAGAGG CCCCCGACCG GGTTCAGCTC GTGGACACGC CGGAAGATGT GCACAAGGTG
ACCGTGCGTG ACCCCTCCAA GGTGGTGTGG GTGTCCCAGA CCACGCTCAG TGTCGACGAG
ACCATGGAGC GGGTGAATCA GCTCAAGGAG CGCTTCCCCG AGTTGGCCGA CCCACCCAGC
GAAGACATCT GCTACGCGAC CTCCAACCGG CAGACCGCGG TGAAGGCCAT GGCCCCCGAA
TGTGACCTCG TGTTGGTGGT GGGGTCTCAG AACTCCTCGA ACTCCAAACG CCTCGTGGAG
GTGGCCCTTC AGGCCGGGGC CCGTGATGCC CATCTGATCG ACTACGCGCA CGAGGTCGAC
GAGAAGTGGT TGGAGGGCGT GGAGACCATC GGCGTCACCA GTGGTGCCTC CGTGCCCGAC
GTGCTGGTCA TGGAACTGCT GGAGAAGCTC GCTGAGCGGG GTTGGGACGA CGTGCAGGAA
GTCACCACCG CCAACGAGAA GATCACGTTC GCCCTGCCAC GCGAACTGCG TGACGGGGGG
AGGGCTCGCA GCAGCGTGAG GTGA
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| Protein sequence | MSTASPTSNG KRVLLAKPRG YCAGVDRAVV TVEKALEKYG PPIYVRKEIV HNKYVVDTLR
KRGVIFVDET SEVPEGSLVV FSAHGVSPAV HAEAAERNLR TIDATCPLVT KVHREVVRFA
RDDYDILLIG HEGHEEVEGT AGEAPDRVQL VDTPEDVHKV TVRDPSKVVW VSQTTLSVDE
TMERVNQLKE RFPELADPPS EDICYATSNR QTAVKAMAPE CDLVLVVGSQ NSSNSKRLVE
VALQAGARDA HLIDYAHEVD EKWLEGVETI GVTSGASVPD VLVMELLEKL AERGWDDVQE
VTTANEKITF ALPRELRDGG RARSSVR
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